2yzq: Difference between revisions

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[[Image:2yzq.png|left|200px]]


{{STRUCTURE_2yzq|  PDB=2yzq  |  SCENE=  }}
==Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii==
 
<StructureSection load='2yzq' size='340' side='right'caption='[[2yzq]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
===Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2yzq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZQ FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
[[2yzq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZQ OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzq OCA], [https://pdbe.org/2yzq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzq RCSB], [https://www.ebi.ac.uk/pdbsum/2yzq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzq ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzq TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O59416_PYRHO O59416_PYRHO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzq_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzq ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
[[Category: Kanagawa, M.]]
[[Category: Kanagawa M]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu S]]
[[Category: Minami, Y.]]
[[Category: Minami Y]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Watanabe N]]
[[Category: Watanabe, N.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Sheet/helix/sheet/sheet/helix]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 16:55, 13 March 2024

Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshiiCrystal structure of uncharacterized conserved protein from Pyrococcus horikoshii

Structural highlights

2yzq is a 1 chain structure with sequence from Pyrococcus horikoshii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.63Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O59416_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2yzq, resolution 1.63Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA