2ywb: Difference between revisions

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[[Image:2ywb.gif|left|200px]]


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==Crystal structure of GMP synthetase from Thermus thermophilus==
The line below this paragraph, containing "STRUCTURE_2ywb", creates the "Structure Box" on the page.
<StructureSection load='2ywb' size='340' side='right'caption='[[2ywb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ywb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywb OCA], [https://pdbe.org/2ywb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywb RCSB], [https://www.ebi.ac.uk/pdbsum/2ywb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywb ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywb TOPSAN]</span></td></tr>
{{STRUCTURE_2ywb| PDB=2ywb |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/GUAA_THET8 GUAA_THET8] Catalyzes the synthesis of GMP from XMP (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywb_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywb ConSurf].
<div style="clear:both"></div>


'''Crystal structure of GMP synthetase from Thermus thermophilus'''
==See Also==
 
*[[GMP synthase|GMP synthase]]
 
__TOC__
==About this Structure==
</StructureSection>
2YWB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWB OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Thermus thermophilus HB8]]
[[Category: Thermus thermophilus]]
[[Category: Baba S]]
[[Category: Baba, S.]]
[[Category: Ishii T]]
[[Category: Ishii, T.]]
[[Category: Kanagawa M]]
[[Category: Kanagawa, M.]]
[[Category: Kawai G]]
[[Category: Kawai, G.]]
[[Category: Kuramitsu S]]
[[Category: Kuramitsu, S.]]
[[Category: Sampei G]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yanai H]]
[[Category: Sampei, G.]]
[[Category: Yokoyama S]]
[[Category: Yanai, H.]]
[[Category: Yokoyama, S.]]
[[Category: Atp binding]]
[[Category: Gmp synthetase]]
[[Category: Ligase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Purine nucleotide biosynthetic pathway]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Xmp binding]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 19:34:53 2008''

Latest revision as of 16:55, 13 March 2024

Crystal structure of GMP synthetase from Thermus thermophilusCrystal structure of GMP synthetase from Thermus thermophilus

Structural highlights

2ywb is a 4 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

GUAA_THET8 Catalyzes the synthesis of GMP from XMP (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ywb, resolution 2.10Å

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