2ysk: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ysk.png|left|200px]]


{{STRUCTURE_2ysk|  PDB=2ysk  |  SCENE=  }}
==Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus==
 
<StructureSection load='2ysk' size='340' side='right'caption='[[2ysk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2ysk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YSK FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[2ysk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSK OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ysk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysk OCA], [https://pdbe.org/2ysk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ysk RCSB], [https://www.ebi.ac.uk/pdbsum/2ysk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysk ProSAT], [https://www.topsan.org/Proteins/RSGI/2ysk TOPSAN]</span></td></tr>
[[Category: Thermus thermophilus]]
</table>
[[Category: Kuramitsu, S.]]
== Function ==
[[Category: Okamoto, A.]]
[https://www.uniprot.org/uniprot/Q5SIE2_THET8 Q5SIE2_THET8]  
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
== Evolutionary Conservation ==
[[Category: Yokoyama, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Conserved hypothetical]]
Check<jmol>
[[Category: National project on protein structural and functional analyse]]
  <jmolCheckbox>
[[Category: Nppsfa]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysk_consurf.spt"</scriptWhenChecked>
[[Category: Riken structural genomics/proteomics initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Rsgi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Structural genomic]]
  </jmolCheckbox>
[[Category: Unknown function]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ysk ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Kuramitsu S]]
[[Category: Okamoto A]]
[[Category: Yokoyama S]]

Latest revision as of 16:54, 13 March 2024

Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilusCrystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus

Structural highlights

2ysk is a 1 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SIE2_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ysk, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA