2r1g: Difference between revisions

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{{Seed}}
[[Image:2r1g.png|left|200px]]


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==Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex==
The line below this paragraph, containing "STRUCTURE_2r1g", creates the "Structure Box" on the page.
<SX load='2r1g' size='340' side='right' viewer='molstar' caption='[[2r1g]], [[Resolution|resolution]] 12.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2r1g]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1G FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1g OCA], [https://pdbe.org/2r1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1g RCSB], [https://www.ebi.ac.uk/pdbsum/2r1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1g ProSAT]</span></td></tr>
{{STRUCTURE_2r1g| PDB=2r1g |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RS9_THET2 RS9_THET2] Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1g_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r1g ConSurf].
<div style="clear:both"></div>


===Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex===
==See Also==
 
*[[Ribosomal protein S12|Ribosomal protein S12]]
 
*[[Ribosomal protein S13|Ribosomal protein S13]]
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*[[Ribosomal protein S9|Ribosomal protein S9]]
The line below this paragraph, {{ABSTRACT_PUBMED_17996707}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 17996707 is the PubMed ID number.
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[[Category: Large Structures]]
{{ABSTRACT_PUBMED_17996707}}
[[Category: Synthetic construct]]
 
[[Category: Thermus thermophilus HB27]]
==About this Structure==
[[Category: Agrawal RK]]
2R1G is a 10 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1G OCA].
[[Category: Booth TM]]
 
[[Category: Datta PP]]
==Reference==
[[Category: Fucini P]]
<ref group="xtra">PMID:17996707</ref><ref group="xtra">PMID:11014170</ref><references group="xtra"/>
[[Category: Kaminishi T]]
[[Category: Thermus thermophilus]]
[[Category: Kawazoe M]]
[[Category: Agrawal, R K.]]
[[Category: Sharma MR]]
[[Category: Booth, T M.]]
[[Category: Swami NK]]
[[Category: Datta, P P.]]
[[Category: Takemoto C]]
[[Category: Fucini, P.]]
[[Category: Wilson DN]]
[[Category: Kaminishi, T.]]
[[Category: Yokoyama S]]
[[Category: Kawazoe, M.]]
[[Category: Sharma, M R.]]
[[Category: Swami, N K.]]
[[Category: Takemoto, C.]]
[[Category: Wilson, D N.]]
[[Category: Yokoyama, S.]]
[[Category: 30s ribosome maturation protein rbfa]]
[[Category: 30s-rbfa complex]]
[[Category: Antibiotic resistance]]
[[Category: Cold shock response protein rbfa]]
[[Category: Rbfa binding site on the 30]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosomal protein/rna complex]]
[[Category: Rna-binding]]
[[Category: Rrna-binding]]
[[Category: Trna-binding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:17:05 2009''

Latest revision as of 16:54, 13 March 2024

Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complexCoordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex

2r1g, resolution 12.50Å

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