2eby: Difference between revisions

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New page: left|200px<br /><applet load="2eby" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eby, resolution 2.25Å" /> '''Crystal structure of...
 
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[[Image:2eby.jpg|left|200px]]<br /><applet load="2eby" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2eby, resolution 2.25&Aring;" />
'''Crystal structure of a hypothetical protein from E. Coli'''<br />


==About this Structure==
==Crystal structure of a hypothetical protein from E. Coli==
2EBY is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBY OCA].  
<StructureSection load='2eby' size='340' side='right'caption='[[2eby]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2eby]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBY FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eby OCA], [https://pdbe.org/2eby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eby RCSB], [https://www.ebi.ac.uk/pdbsum/2eby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eby ProSAT], [https://www.topsan.org/Proteins/RSGI/2eby TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YBAQ_ECOLI YBAQ_ECOLI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2eby_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eby ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Ebihara, A.]]
[[Category: Ebihara A]]
[[Category: Karthe, P.]]
[[Category: Karthe P]]
[[Category: Kumarevel, T.S.]]
[[Category: Kumarevel TS]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu S]]
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: SO4]]
[[Category: hypothetical protein]]
[[Category: jw0472]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
[[Category: transcription]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:49:18 2008''

Latest revision as of 16:49, 13 March 2024

Crystal structure of a hypothetical protein from E. ColiCrystal structure of a hypothetical protein from E. Coli

Structural highlights

2eby is a 2 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.25Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YBAQ_ECOLI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2eby, resolution 2.25Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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