2e1a: Difference between revisions

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[[Image:2e1a.png|left|200px]]


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==crystal structure of FFRP-DM1==
The line below this paragraph, containing "STRUCTURE_2e1a", creates the "Structure Box" on the page.
<StructureSection load='2e1a' size='340' side='right'caption='[[2e1a]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2e1a]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E1A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E1A FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2e1a|  PDB=2e1a  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e1a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e1a OCA], [https://pdbe.org/2e1a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e1a RCSB], [https://www.ebi.ac.uk/pdbsum/2e1a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e1a ProSAT]</span></td></tr>
 
</table>
===crystal structure of FFRP-DM1===
== Function ==
 
[https://www.uniprot.org/uniprot/O73983_PYRHO O73983_PYRHO]  
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e1/2e1a_consurf.spt"</scriptWhenChecked>
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2E1A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E1A OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e1a ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
A structural code for discriminating between transcription signals revealed by the feast/famine regulatory protein DM1 in complex with ligands., Okamura H, Yokoyama K, Koike H, Yamada M, Shimowasa A, Kabasawa M, Kawashima T, Suzuki M, Structure. 2007 Oct;15(10):1325-38. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17937921 17937921]
</StructureSection>
[[Category: Pyrococcus horikoshii]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Koike, H.]]
[[Category: Koike H]]
[[Category: Suzuki, M.]]
[[Category: Suzuki M]]
[[Category: Archaea]]
[[Category: Transcriptional regulatory protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 13:00:22 2008''

Latest revision as of 16:48, 13 March 2024

crystal structure of FFRP-DM1crystal structure of FFRP-DM1

Structural highlights

2e1a is a 4 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O73983_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2e1a, resolution 2.50Å

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