2dsk: Difference between revisions

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[[Image:2dsk.png|left|200px]]


{{STRUCTURE_2dsk|  PDB=2dsk  |  SCENE=  }}
==Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus==
 
<StructureSection load='2dsk' size='340' side='right'caption='[[2dsk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
===Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2dsk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DSK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DSK FirstGlance]. <br>
{{ABSTRACT_PUBMED_17183162}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dsk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dsk OCA], [https://pdbe.org/2dsk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dsk RCSB], [https://www.ebi.ac.uk/pdbsum/2dsk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dsk ProSAT]</span></td></tr>
[[2dsk]] is a 2 chain structure of [[Chitinase]] with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DSK OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8U1H5_PYRFU Q8U1H5_PYRFU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/2dsk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dsk ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Chitinase|Chitinase]]
*[[Chitinase 3D structures|Chitinase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:017183162</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Chitinase]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
[[Category: Hagihara, Y.]]
[[Category: Hagihara Y]]
[[Category: Ishikawa, K.]]
[[Category: Ishikawa K]]
[[Category: Mine, S.]]
[[Category: Mine S]]
[[Category: Nakamura, T.]]
[[Category: Nakamura T]]
[[Category: Uegaki, K.]]
[[Category: Uegaki K]]
[[Category: Active domain]]
[[Category: Catalytic domain]]
[[Category: Chitinase]]
[[Category: Crystalline chitin]]
[[Category: Hydrolase]]
[[Category: Tim-barrel]]

Latest revision as of 16:48, 13 March 2024

Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosusCrystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus

Structural highlights

2dsk is a 2 chain structure with sequence from Pyrococcus furiosus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8U1H5_PYRFU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dsk, resolution 1.50Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA