2dq6: Difference between revisions

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[[Image:2dq6.png|left|200px]]


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==Crystal Structure of Aminopeptidase N from Escherichia coli==
The line below this paragraph, containing "STRUCTURE_2dq6", creates the "Structure Box" on the page.
<StructureSection load='2dq6' size='340' side='right'caption='[[2dq6]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dq6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DQ6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2dq6|  PDB=2dq6 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dq6 OCA], [https://pdbe.org/2dq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dq6 RCSB], [https://www.ebi.ac.uk/pdbsum/2dq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dq6 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AMPN_ECOLI AMPN_ECOLI] Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/2dq6_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dq6 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Aminopeptidase N from Escherichia coli===
==See Also==
 
*[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]]
 
__TOC__
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{{ABSTRACT_PUBMED_16885166}}
 
==About this Structure==
2DQ6 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQ6 OCA].
 
==Reference==
<ref group="xtra">PMID:16885166</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Membrane alanyl aminopeptidase]]
[[Category: Large Structures]]
[[Category: Ito, K.]]
[[Category: Ito K]]
[[Category: Nakajima, Y.]]
[[Category: Nakajima Y]]
[[Category: Onohara, Y.]]
[[Category: Onohara Y]]
[[Category: Yoshimoto, T.]]
[[Category: Yoshimoto T]]
[[Category: Clan ma]]
[[Category: Family m1]]
[[Category: Gluzincin metallopeptidase]]
[[Category: Zinc]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:04:33 2009''

Latest revision as of 16:47, 13 March 2024

Crystal Structure of Aminopeptidase N from Escherichia coliCrystal Structure of Aminopeptidase N from Escherichia coli

Structural highlights

2dq6 is a 1 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AMPN_ECOLI Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dq6, resolution 1.50Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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