2dch: Difference between revisions

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[[Image:2dch.gif|left|200px]]


{{Structure
==Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I==
|PDB= 2dch |SIZE=350|CAPTION= <scene name='initialview01'>2dch</scene>, resolution 2.06&Aring;
<StructureSection load='2dch' size='340' side='right'caption='[[2dch]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> and <scene name='pdbligand=SO4:SULFATE ION'>SO4</scene>
<table><tr><td colspan='2'>[[2dch]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoproteus Thermoproteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DCH FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.06&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dch OCA], [https://pdbe.org/2dch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dch RCSB], [https://www.ebi.ac.uk/pdbsum/2dch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dch ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8J309_9CREN Q8J309_9CREN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/2dch_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dch ConSurf].
<div style="clear:both"></div>


'''Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I'''
==See Also==
 
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2DCH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoproteaceae Thermoproteaceae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCH OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Thermoproteus]]
[[Category: Thermoproteaceae]]
[[Category: Miyano M]]
[[Category: Miyano, M.]]
[[Category: Nakayama H]]
[[Category: Nakayama, H.]]
[[Category: Nomura N]]
[[Category: Nomura, N.]]
[[Category: Sako Y]]
[[Category: Sako, Y.]]
[[Category: Shimamura T]]
[[Category: Shimamura, T.]]
[[Category: Tsuge H]]
[[Category: Tsuge, H.]]
[[Category: CL]]
[[Category: SO4]]
[[Category: alpha/beta fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:25:38 2008''

Latest revision as of 16:47, 13 March 2024

Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061ICrystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I

Structural highlights

2dch is a 1 chain structure with sequence from Thermoproteus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.06Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8J309_9CREN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dch, resolution 2.06Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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