2d73: Difference between revisions

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-{{Seed}}
-[[Image:2d73.png|left|200px]]
-<!--
+==Crystal Structure Analysis of SusB==
-The line below this paragraph, containing "STRUCTURE_2d73", creates the "Structure Box" on the page.
+<StructureSection load='2d73' size='340' side='right'caption='[[2d73]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2d73]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D73 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D73 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-{{STRUCTURE_2d73|  PDB=2d73  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d73 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d73 OCA], [https://pdbe.org/2d73 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d73 RCSB], [https://www.ebi.ac.uk/pdbsum/2d73 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d73 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SUSB_BACTN SUSB_BACTN] Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation.<ref>PMID:8955399</ref> <ref>PMID:18981178</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/2d73_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d73 ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure Analysis of SusB===
+==See Also==
+*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_18981178}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 18981178 is the PubMed ID number.
+</StructureSection>
--->
+[[Category: Bacteroides thetaiotaomicron VPI-5482]]
-{{ABSTRACT_PUBMED_18981178}}
+[[Category: Large Structures]]
+[[Category: Kitamura M]]
-==About this Structure==
+[[Category: Yao M]]
-D73 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D73 OCA].
-==Reference==
-<ref group="xtra">PMID:18981178</ref><references group="xtra"/>
-[[Category: Alpha-glucosidase]]
-[[Category: Bacteria]]
-[[Category: Kitamura, M.]]
-[[Category: Yao, M.]]
-[[Category: Glycoside hydrolase family 97]]
-[[Category: Tim barrel]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 22 20:55:40 2009''