2d59: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2d59.jpg|left|200px]]
-<!--
+==hypothetical protein from Pyrococcus horikoshii OT3==
-The line below this paragraph, containing "STRUCTURE_2d59", creates the "Structure Box" on the page.
+<StructureSection load='2d59' size='340' side='right'caption='[[2d59]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2d59]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D59 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D59 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d59 OCA], [https://pdbe.org/2d59 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d59 RCSB], [https://www.ebi.ac.uk/pdbsum/2d59 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d59 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d59 TOPSAN]</span></td></tr>
-{{STRUCTURE_2d59|  PDB=2d59  |  SCENE=  }}
+</table>
+== Function ==
-'''hypothetical protein from Pyrococcus horikoshii OT3'''
+[https://www.uniprot.org/uniprot/O58836_PYRHO O58836_PYRHO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-D59 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D59 OCA].
+  <jmolCheckbox>
-[[Category: Pyrococcus horikoshii]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d59_consurf.spt"</scriptWhenChecked>
-[[Category: Single protein]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Hiyama, B T.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+  </jmolCheckbox>
-[[Category: Sekine, S.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d59 ConSurf].
-[[Category: Yokoyama, S.]]
+<div style="clear:both"></div>
-[[Category: Coa binding]]
+__TOC__
-[[Category: Hypothetical protein]]
+</StructureSection>
-[[Category: National project on protein structural and functional analyse]]
+[[Category: Large Structures]]
-[[Category: Nppsfa]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Hiyama TB]]
-[[Category: Rsgi]]
+[[Category: Sekine S]]
-[[Category: Structural genomic]]
+[[Category: Yokoyama S]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 23:43:37 2008''