2cw2: Difference between revisions

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OCA

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-[[Image:2cw2.png|left|200px]]
-<!--
+==Crystal structure of Superoxide dismutase from P. Marinus==
-The line below this paragraph, containing "STRUCTURE_2cw2", creates the "Structure Box" on the page.
+<StructureSection load='2cw2' size='340' side='right'caption='[[2cw2]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2cw2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Perkinsus_marinus Perkinsus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CW2 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-{{STRUCTURE_2cw2|  PDB=2cw2  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw2 OCA], [https://pdbe.org/2cw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cw2 RCSB], [https://www.ebi.ac.uk/pdbsum/2cw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw2 ProSAT]</span></td></tr>
+</table>
-===Crystal structure of Superoxide dismutase from P. Marinus===
+== Function ==
+[https://www.uniprot.org/uniprot/Q8ISJ0_9ALVE Q8ISJ0_9ALVE] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).[RuleBase:RU000414]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_17077482}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 17077482 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cw2_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_17077482}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[2cw2]] is a 2 chain structure of [[Superoxide Dismutase]] with sequence from [http://en.wikipedia.org/wiki/Perkinsus_marinus Perkinsus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW2 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cw2 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Superoxide Dismutase]]
+*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:17077482</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Perkinsus marinus]]
-[[Category: Superoxide dismutase]]
+[[Category: Asojo OA]]
-[[Category: Asojo, O A.]]
+[[Category: Schott EJ]]
-[[Category: Schott, E J.]]
+[[Category: Silva AM]]
-[[Category: Silva, A M.]]
+[[Category: Vasta GR]]
-[[Category: Vasta, G R.]]
-[[Category: Oxidoreductase]]
-[[Category: Sod]]