1yoa: Difference between revisions

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{{Seed}}
[[Image:1yoa.png|left|200px]]


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==Crystal structure of a probable flavoprotein from Thermus thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_1yoa", creates the "Structure Box" on the page.
<StructureSection load='1yoa' size='340' side='right'caption='[[1yoa]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yoa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YOA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YOA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
{{STRUCTURE_1yoa|  PDB=1yoa  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yoa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yoa OCA], [https://pdbe.org/1yoa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yoa RCSB], [https://www.ebi.ac.uk/pdbsum/1yoa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yoa ProSAT], [https://www.topsan.org/Proteins/RSGI/1yoa TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a probable flavoprotein from Thermus thermophilus HB8===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SL73_THET8 Q5SL73_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1YOA is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YOA OCA].  
Check<jmol>
[[Category: Thermus thermophilus]]
  <jmolCheckbox>
[[Category: Imagawa, T.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yo/1yoa_consurf.spt"</scriptWhenChecked>
[[Category: Kuramitsu, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sugimoto, Y.]]
  </jmolCheckbox>
[[Category: Tsuge, H.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yoa ConSurf].
[[Category: Utsunomiya, H.]]
<div style="clear:both"></div>
[[Category: Yokoyama, S.]]
__TOC__
[[Category: Fad]]
</StructureSection>
[[Category: Flavoprotein]]
[[Category: Large Structures]]
[[Category: Hb8]]
[[Category: Thermus thermophilus HB8]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Imagawa T]]
[[Category: Rsgi]]
[[Category: Kuramitsu S]]
[[Category: Structural genomic]]
[[Category: Sugimoto Y]]
 
[[Category: Tsuge H]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:13:54 2008''
[[Category: Utsunomiya H]]
[[Category: Yokoyama S]]

Latest revision as of 16:38, 13 March 2024

Crystal structure of a probable flavoprotein from Thermus thermophilus HB8Crystal structure of a probable flavoprotein from Thermus thermophilus HB8

Structural highlights

1yoa is a 1 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SL73_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1yoa, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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