1ynz: Difference between revisions

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[[Image:1ynz.png|left|200px]]


{{STRUCTURE_1ynz|  PDB=1ynz  |  SCENE=  }}
==SH3 domain of yeast Pin3==
 
<StructureSection load='1ynz' size='340' side='right'caption='[[1ynz]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
===SH3 domain of yeast Pin3===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1ynz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YNZ FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ynz OCA], [https://pdbe.org/1ynz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ynz RCSB], [https://www.ebi.ac.uk/pdbsum/1ynz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ynz ProSAT]</span></td></tr>
[[1ynz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNZ OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/PIN3_YEAST PIN3_YEAST] Overproduction promotes the de novo induction of the [PSI+] prion form of SUP35. The prion-inducing effect depends on the association with the actin cytoskeleton. Also implicated in prion maintenance during heat stress.<ref>PMID:21777813</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1ynz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ynz ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Kursula, I.]]
[[Category: Kursula I]]
[[Category: Kursula, P.]]
[[Category: Kursula P]]
[[Category: Lehmann, F.]]
[[Category: Lehmann F]]
[[Category: Song, Y H.]]
[[Category: Song YH]]
[[Category: Wilmanns, M.]]
[[Category: Wilmanns M]]
[[Category: Zou, P.]]
[[Category: Zou P]]
[[Category: Protein binding]]
[[Category: Sh3 domain]]

Latest revision as of 16:38, 13 March 2024

SH3 domain of yeast Pin3SH3 domain of yeast Pin3

Structural highlights

1ynz is a 1 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PIN3_YEAST Overproduction promotes the de novo induction of the [PSI+] prion form of SUP35. The prion-inducing effect depends on the association with the actin cytoskeleton. Also implicated in prion maintenance during heat stress.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Chernova TA, Romanyuk AV, Karpova TS, Shanks JR, Ali M, Moffatt N, Howie RL, O'Dell A, McNally JG, Liebman SW, Chernoff YO, Wilkinson KD. Prion induction by the short-lived, stress-induced protein Lsb2 is regulated by ubiquitination and association with the actin cytoskeleton. Mol Cell. 2011 Jul 22;43(2):242-52. doi: 10.1016/j.molcel.2011.07.001. PMID:21777813 doi:http://dx.doi.org/10.1016/j.molcel.2011.07.001

1ynz, resolution 2.20Å

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OCA
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