1wy0: Difference between revisions

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{{Seed}}
[[Image:1wy0.png|left|200px]]


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==Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3==
The line below this paragraph, containing "STRUCTURE_1wy0", creates the "Structure Box" on the page.
<StructureSection load='1wy0' size='340' side='right'caption='[[1wy0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wy0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WY0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
{{STRUCTURE_1wy0|  PDB=1wy0  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wy0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wy0 OCA], [https://pdbe.org/1wy0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wy0 RCSB], [https://www.ebi.ac.uk/pdbsum/1wy0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wy0 ProSAT], [https://www.topsan.org/Proteins/RSGI/1wy0 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3===
== Function ==
 
[https://www.uniprot.org/uniprot/O58799_PYRHO O58799_PYRHO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1WY0 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY0 OCA].  
Check<jmol>
[[Category: Pyrococcus horikoshii]]
  <jmolCheckbox>
[[Category: Kunishima, N.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wy0_consurf.spt"</scriptWhenChecked>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sugahara, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Geranylgeranyl pyrophosphate synthetase]]
  </jmolCheckbox>
[[Category: Ph1072]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wy0 ConSurf].
[[Category: Pyrococcus horikoshii]]
<div style="clear:both"></div>
[[Category: Riken structural genomics/proteomics initiative]]
__TOC__
[[Category: Rsgi]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Large Structures]]
 
[[Category: Pyrococcus horikoshii OT3]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:56:12 2008''
[[Category: Kunishima N]]
[[Category: Sugahara M]]

Latest revision as of 16:35, 13 March 2024

Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3

Structural highlights

1wy0 is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O58799_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1wy0, resolution 2.20Å

Drag the structure with the mouse to rotate

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OCA
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