1wue: Difference between revisions

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New page: left|200px<br /><applet load="1wue" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wue, resolution 2.1Å" /> '''Crystal structure of ...
 
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[[Image:1wue.gif|left|200px]]<br /><applet load="1wue" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1wue, resolution 2.1&Aring;" />
'''Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583'''<br />


==About this Structure==
==Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583==
1WUE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1WUE OCA].  
<StructureSection load='1wue' size='340' side='right'caption='[[1wue]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Enterococcus faecalis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1wue]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WUE FirstGlance]. <br>
[[Category: Almo, S.C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: Burley, S.K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wue OCA], [https://pdbe.org/1wue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wue RCSB], [https://www.ebi.ac.uk/pdbsum/1wue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wue ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1wue TOPSAN]</span></td></tr>
[[Category: Fedorov, A.A.]]
</table>
[[Category: Fedorov, E.V.]]
== Function ==
[[Category: Gerlt, J.A.]]
[https://www.uniprot.org/uniprot/MENC_ENTFA MENC_ENTFA] Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (PubMed:24872444). Also acts as a N-succinylamino acid racemase (NSAR) that catalyzes the racemization of N-succinyl-L-phenylglycine (PubMed:24872444). Since the gene is encoded in a menaquinone synthesis operon, OSB synthase is probably the physiological activity. A pathway that requires NSAR activity has not been identified in this species, so whether NSAR is also a biological activity is unknown (PubMed:24872444).<ref>PMID:24872444</ref>
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
== Evolutionary Conservation ==
[[Category: Yew, W.S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: enolase superfamily]]
Check<jmol>
[[Category: new york structural genomix research consortium]]
  <jmolCheckbox>
[[Category: nysgxrc target t2185]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wu/1wue_consurf.spt"</scriptWhenChecked>
[[Category: protein structure initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: psi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
[[Category: unknown function]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wue ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:45:48 2007''
==See Also==
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Enterococcus faecalis V583]]
[[Category: Large Structures]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Fedorov AA]]
[[Category: Fedorov EV]]
[[Category: Gerlt JA]]
[[Category: Yew WS]]

Latest revision as of 16:34, 13 March 2024

Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583

Structural highlights

1wue is a 2 chain structure with sequence from Enterococcus faecalis V583. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

MENC_ENTFA Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (PubMed:24872444). Also acts as a N-succinylamino acid racemase (NSAR) that catalyzes the racemization of N-succinyl-L-phenylglycine (PubMed:24872444). Since the gene is encoded in a menaquinone synthesis operon, OSB synthase is probably the physiological activity. A pathway that requires NSAR activity has not been identified in this species, so whether NSAR is also a biological activity is unknown (PubMed:24872444).[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. Odokonyero D, Sakai A, Patskovsky Y, Malashkevich VN, Fedorov AA, Bonanno JB, Fedorov EV, Toro R, Agarwal R, Wang C, Ozerova ND, Yew WS, Sauder JM, Swaminathan S, Burley SK, Almo SC, Glasner ME. Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family. Proc Natl Acad Sci U S A. 2014 May 28. pii: 201318703. PMID:24872444 doi:http://dx.doi.org/10.1073/pnas.1318703111

1wue, resolution 2.10Å

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