1wn1: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1wn1.gif|left|200px]]
-<!--
+==Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3==
-The line below this paragraph, containing "STRUCTURE_1wn1", creates the "Structure Box" on the page.
+<StructureSection load='1wn1' size='340' side='right'caption='[[1wn1]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1wn1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WN1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WN1 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
-{{STRUCTURE_1wn1|  PDB=1wn1  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wn1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wn1 OCA], [https://pdbe.org/1wn1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wn1 RCSB], [https://www.ebi.ac.uk/pdbsum/1wn1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wn1 ProSAT], [https://www.topsan.org/Proteins/RSGI/1wn1 TOPSAN]</span></td></tr>
+</table>
-'''Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3'''
+== Function ==
+[https://www.uniprot.org/uniprot/O58691_PYRHO O58691_PYRHO]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-WN1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WN1 OCA].
+Check<jmol>
-[[Category: Pyrococcus horikoshii ot3]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wn/1wn1_consurf.spt"</scriptWhenChecked>
-[[Category: Jeyakanthan, J.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Kitaguchi, Y.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+  </jmolCheckbox>
-[[Category: Shiro, Y.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wn1 ConSurf].
-[[Category: Taka, J.]]
+<div style="clear:both"></div>
-[[Category: Yokoyama, S.]]
+__TOC__
-[[Category: Yutani, K.]]
+</StructureSection>
-[[Category: Peptidase]]
+[[Category: Large Structures]]
-[[Category: Prolidase]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Jeyakanthan J]]
-[[Category: Rsgi]]
+[[Category: Kitaguchi Y]]
-[[Category: Structural genomic]]
+[[Category: Shiro Y]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 13:53:53 2008''
+[[Category: Taka J]]
+[[Category: Yokoyama S]]
+[[Category: Yutani K]]