1t6c: Difference between revisions

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[[Image:1t6c.png|left|200px]]


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==Structural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family member==
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<StructureSection load='1t6c' size='340' side='right'caption='[[1t6c]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1t6c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T6C FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
{{STRUCTURE_1t6c|  PDB=1t6c  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t6c OCA], [https://pdbe.org/1t6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t6c RCSB], [https://www.ebi.ac.uk/pdbsum/1t6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t6c ProSAT]</span></td></tr>
 
</table>
===Structural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family member===
== Function ==
 
[https://www.uniprot.org/uniprot/O67040_AQUAE O67040_AQUAE]
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t6/1t6c_consurf.spt"</scriptWhenChecked>
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[1t6c]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6C OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t6c ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15248747</ref><ref group="xtra">PMID:11474114</ref><ref group="xtra">PMID:8394006</ref><ref group="xtra">PMID:8212131</ref><references group="xtra"/>
</StructureSection>
[[Category: Aquifex aeolicus vf5]]
[[Category: Aquifex aeolicus VF5]]
[[Category: Gajhede, M.]]
[[Category: Large Structures]]
[[Category: Kastrup, J S.]]
[[Category: Gajhede M]]
[[Category: Kristensen, O.]]
[[Category: Kastrup JS]]
[[Category: Laurberg, M.]]
[[Category: Kristensen O]]
[[Category: Liljas, A.]]
[[Category: Laurberg M]]
[[Category: Actin-like fold]]
[[Category: Liljas A]]
[[Category: Alpha/beta protein]]
[[Category: Hydrolase]]

Latest revision as of 16:30, 13 March 2024

Structural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family memberStructural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family member

Structural highlights

1t6c is a 1 chain structure with sequence from Aquifex aeolicus VF5. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.53Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O67040_AQUAE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1t6c, resolution 1.53Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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