1nd4: Difference between revisions

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-[[Image:1nd4.png|left|200px]]
-{{STRUCTURE_1nd4|  PDB=1nd4  |  SCENE=  }}
+==Crystal structure of aminoglycoside-3'-phosphotransferase-IIa==
+<StructureSection load='1nd4' size='340' side='right'caption='[[1nd4]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-===Crystal structure of aminoglycoside-3'-phosphotransferase-IIa===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1nd4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ND4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ND4 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_12628253}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=KAN:KANAMYCIN+A'>KAN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nd4 OCA], [https://pdbe.org/1nd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nd4 RCSB], [https://www.ebi.ac.uk/pdbsum/1nd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nd4 ProSAT]</span></td></tr>
-[[1nd4]] is a 2 chain structure of [[Phosphotransferase]] with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ND4 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/KKA2_KLEPN KKA2_KLEPN] Resistance to kanamycin, neomycin, paromomycin, ribostamycin, butirosin and gentamicin B.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nd/1nd4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nd4 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Phosphotransferase|Phosphotransferase]]
+*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:012628253</ref><references group="xtra"/>
-[[Category: Kanamycin kinase]]
 [[Category: Klebsiella pneumoniae]]
-[[Category: Baker, E N.]]
+[[Category: Large Structures]]
-[[Category: Nurizzo, D.]]
+[[Category: Baker EN]]
-[[Category: Shewry, S C.]]
+[[Category: Nurizzo D]]
-[[Category: Smith, C A.]]
+[[Category: Shewry SC]]
-[[Category: Atpase]]
+[[Category: Smith CA]]
-[[Category: Kanamycin]]
-[[Category: Phosphotransferase]]
-[[Category: Protein kinase]]
-[[Category: Transferase]]