1jfb: Difference between revisions

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-[[Image:1jfb.png|left|200px]]
-<!--
+==X-ray structure of nitric oxide reductase (cytochrome P450nor) in the ferric resting state at atomic resolution==
-The line below this paragraph, containing "STRUCTURE_1jfb", creates the "Structure Box" on the page.
+<StructureSection load='1jfb' size='340' side='right'caption='[[1jfb]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1jfb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fusarium_oxysporum Fusarium oxysporum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JFB FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-{{STRUCTURE_1jfb|  PDB=1jfb  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jfb OCA], [https://pdbe.org/1jfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jfb RCSB], [https://www.ebi.ac.uk/pdbsum/1jfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jfb ProSAT], [https://www.topsan.org/Proteins/RSGI/1jfb TOPSAN]</span></td></tr>
+</table>
-===X-ray structure of nitric oxide reductase (cytochrome P450nor) in the ferric resting state at atomic resolution===
+== Function ==
+[https://www.uniprot.org/uniprot/NOR_FUSOX NOR_FUSOX] Nitric oxide reductase which is involved in a dissimilatory reduction of nitrite. Acts as a nitric oxide reductase. Is able to reduce nitrate and nitrite to a gaseous form of N(2)O when oxygen supply is limited or discontinued. May function as a detoxification mechanism.<ref>PMID:2040619</ref> <ref>PMID:12105197</ref>
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_11752781}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 11752781 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jf/1jfb_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_11752781}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[1jfb]] is a 1 chain structure of [[Cytochrome P450]] with sequence from [http://en.wikipedia.org/wiki/Fusarium_oxysporum Fusarium oxysporum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFB OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jfb ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Cytochrome P450]]
+*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
+== References ==
-==Reference==
+<references/>
-<ref group="xtra">PMID:11752781</ref><references group="xtra"/>
+__TOC__
+</StructureSection>
 [[Category: Fusarium oxysporum]]
-[[Category: Nitric-oxide reductase]]
+[[Category: Large Structures]]
-[[Category: Adachi, S.]]
+[[Category: Adachi S]]
-[[Category: Park, S Y.]]
+[[Category: Park SY]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Shimizu H]]
-[[Category: Shimizu, H.]]
+[[Category: Shiro Y]]
-[[Category: Shiro, Y.]]
-[[Category: Atomic resolution]]
-[[Category: Cytochrome p450nor]]
-[[Category: Nitric oxide reductase]]
-[[Category: Oxidoreductase]]
-[[Category: Riken structural genomics/proteomics initiative]]
-[[Category: Rsgi]]
-[[Category: Structural genomic]]