1hvx: Difference between revisions

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{{Seed}}
[[Image:1hvx.png|left|200px]]


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==BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE==
The line below this paragraph, containing "STRUCTURE_1hvx", creates the "Structure Box" on the page.
<StructureSection load='1hvx' size='340' side='right'caption='[[1hvx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1hvx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HVX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_1hvx|  PDB=1hvx |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hvx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hvx OCA], [https://pdbe.org/1hvx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hvx RCSB], [https://www.ebi.ac.uk/pdbsum/1hvx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hvx ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AMY_GEOSE AMY_GEOSE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hv/1hvx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hvx ConSurf].
<div style="clear:both"></div>


===BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE===
==See Also==
 
*[[Amylase|Amylase]]
 
*[[Amylase 3D structures|Amylase 3D structures]]
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The line below this paragraph, {{ABSTRACT_PUBMED_11226887}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 11226887 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_11226887}}
 
==About this Structure==
1HVX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HVX OCA].
 
==Reference==
Crystal structure of Bacillus stearothermophilus alpha-amylase: possible factors determining the thermostability., Suvd D, Fujimoto Z, Takase K, Matsumura M, Mizuno H, J Biochem. 2001 Mar;129(3):461-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11226887 11226887]
[[Category: Alpha-amylase]]
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Fujimoto, Z.]]
[[Category: Fujimoto Z]]
[[Category: Matsumura, M.]]
[[Category: Matsumura M]]
[[Category: Mizuno, H.]]
[[Category: Mizuno H]]
[[Category: Suvd, D.]]
[[Category: Suvd D]]
[[Category: Takase, K.]]
[[Category: Takase K]]
[[Category: Alpha-1,4-glucan-4-glucanohydrolase]]
[[Category: Alpha-amylase,starch degradation]]
[[Category: Calcium]]
[[Category: Glycosyltransferase]]
[[Category: Hydrolase]]
[[Category: Sodium]]
[[Category: Thermostability]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 08:53:37 2008''

Latest revision as of 16:24, 13 March 2024

BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASEBACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE

Structural highlights

1hvx is a 1 chain structure with sequence from Geobacillus stearothermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AMY_GEOSE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1hvx, resolution 2.00Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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