1svn: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:1svn.png|left|200px]]
-<!--
+==SAVINASE==
-The line below this paragraph, containing "STRUCTURE_1svn", creates the "Structure Box" on the page.
+<StructureSection load='1svn' size='340' side='right'caption='[[1svn]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1svn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lederbergia_lenta Lederbergia lenta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SVN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SVN FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-{{STRUCTURE_1svn|  PDB=1svn  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1svn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1svn OCA], [https://pdbe.org/1svn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1svn RCSB], [https://www.ebi.ac.uk/pdbsum/1svn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1svn ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SUBS_LEDLE SUBS_LEDLE] Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sv/1svn_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1svn ConSurf].
+<div style="clear:both"></div>
-===SAVINASE===
+==See Also==
+*[[Subtilisin 3D structures|Subtilisin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_1738156}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 1738156 is the PubMed ID number.
+[[Category: Lederbergia lenta]]
--->
+[[Category: Betzel C]]
-{{ABSTRACT_PUBMED_1738156}}
+[[Category: Branner S]]
+[[Category: Hastrup S]]
-==About this Structure==
+[[Category: Klupsch S]]
-SVN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_lentus Bacillus lentus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SVN OCA].
+[[Category: Papendorf G]]
+[[Category: Wilson KS]]
-==Reference==
-Crystal structure of the alkaline proteinase Savinase from Bacillus lentus at 1.4 A resolution., Betzel C, Klupsch S, Papendorf G, Hastrup S, Branner S, Wilson KS, J Mol Biol. 1992 Jan 20;223(2):427-45. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1738156 1738156]
-[[Category: Bacillus lentus]]
-[[Category: Single protein]]
-[[Category: Subtilisin]]
-[[Category: Betzel, C.]]
-[[Category: Branner, S.]]
-[[Category: Hastrup, S.]]
-[[Category: Klupsch, S.]]
-[[Category: Papendorf, G.]]
-[[Category: Wilson, K S.]]
-[[Category: Calcium-binding]]
-[[Category: Hydrolase]]
-[[Category: Serine protease]]
-[[Category: Sporulation]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 04:02:19 2008''