5rai: Difference between revisions
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New page: '''Unreleased structure''' The entry 5rai is ON HOLD Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H, Bountra, C., Edwards, A.M, Oppermann, U. Descrip... |
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==PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS040404c== | |||
<StructureSection load='5rai' size='340' side='right'caption='[[5rai]], [[Resolution|resolution]] 1.54Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5rai]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5RAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5RAI FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=S3M:(1-methyl-5-phenyl-pyrazol-3-yl)methanol'>S3M</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5rai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5rai OCA], [https://pdbe.org/5rai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5rai RCSB], [https://www.ebi.ac.uk/pdbsum/5rai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5rai ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/KDM3B_HUMAN KDM3B_HUMAN] Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May have tumor suppressor activity.<ref>PMID:16603237</ref> | |||
==See Also== | |||
*[[Jumonji domain-containing protein 3D structures|Jumonji domain-containing protein 3D structures]] | |||
== References == | |||
[[Category: | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: Burgess-Brown | </StructureSection> | ||
[[Category: Edwards | [[Category: Homo sapiens]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Arrowsmith CH]] | ||
[[Category: Snee | [[Category: Bountra C]] | ||
[[Category: Burgess-Brown NA]] | |||
[[Category: Edwards AM]] | |||
[[Category: Johansson C]] | |||
[[Category: Nowak R]] | |||
[[Category: Oppermann U]] | |||
[[Category: Snee M]] | |||
Latest revision as of 16:40, 1 March 2024
PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS040404cPanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS040404c
Structural highlights
FunctionKDM3B_HUMAN Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May have tumor suppressor activity.[1] See AlsoReferences
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