4oi0: Difference between revisions

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-==Structure of a RNA-processing protein==
-<StructureSection load='4oi0' size='340' side='right' caption='[[4oi0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+==bound to ssRNA dinucleotide GC, ADP, AlF4-, and Mg2+(transition state, data set I)==
+<StructureSection load='4oi0' size='340' side='right'caption='[[4oi0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4oi0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OI0 OCA]. <br>
+<table><tr><td colspan='2'>[[4oi0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OI0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OI0 FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SAR:SARCOSINE'>SAR</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ohv|4ohv]], [[4ohw|4ohw]], [[4ohx|4ohx]], [[4ohy|4ohy]], [[4ohz|4ohz]], [[4oi1|4oi1]], [[4oi2|4oi2]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SAR:SARCOSINE'>SAR</scene></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4oi0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oi0 OCA], [https://pdbe.org/4oi0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4oi0 RCSB], [https://www.ebi.ac.uk/pdbsum/4oi0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4oi0 ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4oi0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oi0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4oi0 RCSB], [http://www.ebi.ac.uk/pdbsum/4oi0 PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/CLP1_CAEEL CLP1_CAEEL] Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation (By similarity).
 __TOC__
 </StructureSection>
-[[Category: Clausen, T.]]
+[[Category: Caenorhabditis elegans]]
-[[Category: Dikfidan, A.]]
+[[Category: Large Structures]]
-[[Category: Loll, B.]]
+[[Category: Clausen T]]
-[[Category: Meinhart, A.]]
+[[Category: Dikfidan A]]
-[[Category: Zeymer, C.]]
+[[Category: Loll B]]
-[[Category: Polynucleotide kinase]]
+[[Category: Meinhart A]]
-[[Category: Rna binding protein-rna complex]]
+[[Category: Zeymer C]]