4mco: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{STRUCTURE_4mco|  PDB=4mco  |  SCENE=  }}
-===Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), target EFI-510211, with bound malonate===
-==About this Structure==
+==Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), target EFI-510211, with bound malonate==
-[[4mco]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodoferax_ferrireducens_t118 Rhodoferax ferrireducens t118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MCO OCA].
+<StructureSection load='4mco' size='340' side='right'caption='[[4mco]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-[[Category: Rhodoferax ferrireducens t118]]
+== Structural highlights ==
-[[Category: Almo, S C.]]
+<table><tr><td colspan='2'>[[4mco]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodoferax_ferrireducens_T118 Rhodoferax ferrireducens T118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MCO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MCO FirstGlance]. <br>
-[[Category: Bhosle, R.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-[[Category: Chowdhury, S.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr>
-[[Category: EFI, Enzyme Function Initiative.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mco FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mco OCA], [https://pdbe.org/4mco PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mco RCSB], [https://www.ebi.ac.uk/pdbsum/4mco PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mco ProSAT]</span></td></tr>
-[[Category: Evans, B.]]
+</table>
-[[Category: Gerlt, J A.]]
+== Function ==
-[[Category: Glenn, A Scott.]]
+[https://www.uniprot.org/uniprot/DCTP_ALBFT DCTP_ALBFT] Solute-binding protein that binds malonate (in vitro) (PubMed:25540822). Probably part of a tripartite ATP-independent periplasmic (TRAP) transport system that mediates solute transport into the cytoplasm.<ref>PMID:25540822</ref>
-[[Category: Hammonds, J.]]
-[[Category: Hillerich, B.]]
+==See Also==
-[[Category: Imker, H J.]]
+*[[TRAP dicarboxylate transporter%2C DctP subunit|TRAP dicarboxylate transporter%2C DctP subunit]]
-[[Category: Jacobson, M P.]]
+== References ==
-[[Category: Love, J.]]
+<references/>
-[[Category: Morisco, L L.]]
+__TOC__
-[[Category: Obaidi, N F.Al.]]
+</StructureSection>
-[[Category: Seidel, R D.]]
+[[Category: Large Structures]]
-[[Category: Sojitra, S.]]
+[[Category: Rhodoferax ferrireducens T118]]
-[[Category: Stead, M.]]
+[[Category: Al Obaidi NF]]
-[[Category: Toro, R.]]
+[[Category: Almo SC]]
-[[Category: Vetting, M W.]]
+[[Category: Bhosle R]]
-[[Category: Washington, E.]]
+[[Category: Chowdhury S]]
-[[Category: Wasserman, S R.]]
+[[Category: Evans B]]
-[[Category: Zhao, S.]]
+[[Category: Gerlt JA]]
-[[Category: Efi]]
+[[Category: Hammonds J]]
-[[Category: Enzyme function initiative]]
+[[Category: Hillerich B]]
-[[Category: Structural genomic]]
+[[Category: Imker HJ]]
-[[Category: Transport protein]]
+[[Category: Jacobson MP]]
-[[Category: Trap periplasmic solute binding family]]
+[[Category: Love J]]
+[[Category: Morisco LL]]
+[[Category: Scott Glenn A]]
+[[Category: Seidel RD]]
+[[Category: Sojitra S]]
+[[Category: Stead M]]
+[[Category: Toro R]]
+[[Category: Vetting MW]]
+[[Category: Washington E]]
+[[Category: Wasserman SR]]
+[[Category: Zhao S]]