4fll: Difference between revisions

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New page: '''Unreleased structure''' The entry 4fll is ON HOLD Authors: Ye, Q.Z., Xu, W. Description: Human MetAP1 with bengamide analog YZ6, in Mn form
 
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'''Unreleased structure'''


The entry 4fll is ON HOLD
==Human MetAP1 with bengamide analog YZ6, in Mn form==
<StructureSection load='4fll' size='340' side='right'caption='[[4fll]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4fll]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FLL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FLL FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=YZ6:(E,2R,3R,4S,5R)-N-[(3R)-3-(FURAN-2-YL)-3-PHENYL-PROPYL]-2-METHOXY-8,8-DIMETHYL-3,4,5-TRIS(OXIDANYL)NON-6-ENAMIDE'>YZ6</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fll FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fll OCA], [https://pdbe.org/4fll PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fll RCSB], [https://www.ebi.ac.uk/pdbsum/4fll PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fll ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MAP11_HUMAN MAP11_HUMAN] Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Required for normal progression through the cell cycle.[HAMAP-Rule:MF_03174]<ref>PMID:16274222</ref> <ref>PMID:17114291</ref>


Authors: Ye, Q.Z., Xu, W.
==See Also==
 
*[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]]
Description: Human MetAP1 with bengamide analog YZ6, in Mn form
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Xu W]]
[[Category: Ye QZ]]

Latest revision as of 14:17, 1 March 2024

Human MetAP1 with bengamide analog YZ6, in Mn formHuman MetAP1 with bengamide analog YZ6, in Mn form

Structural highlights

4fll is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MAP11_HUMAN Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Required for normal progression through the cell cycle.[HAMAP-Rule:MF_03174][1] [2]

See Also

References

  1. Addlagatta A, Hu X, Liu JO, Matthews BW. Structural basis for the functional differences between type I and type II human methionine aminopeptidases. Biochemistry. 2005 Nov 15;44(45):14741-9. PMID:16274222 doi:10.1021/bi051691k
  2. Hu X, Addlagatta A, Lu J, Matthews BW, Liu JO. Elucidation of the function of type 1 human methionine aminopeptidase during cell cycle progression. Proc Natl Acad Sci U S A. 2006 Nov 28;103(48):18148-53. Epub 2006 Nov 17. PMID:17114291

4fll, resolution 1.50Å

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