4dts: Difference between revisions

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[[Image:4dts.png|left|200px]]


{{STRUCTURE_4dts| PDB=4dts | SCENE= }}
==RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair==
<StructureSection load='4dts' size='340' side='right'caption='[[4dts]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4dts]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DTS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DTS FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3DR:1,2-DIDEOXYRIBOFURANOSE-5-PHOSPHATE'>3DR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DCP:2-DEOXYCYTIDINE-5-TRIPHOSPHATE'>DCP</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dts FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dts OCA], [https://pdbe.org/4dts PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dts RCSB], [https://www.ebi.ac.uk/pdbsum/4dts PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dts ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.


===RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair===
==See Also==
 
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
{{ABSTRACT_PUBMED_22630605}}
__TOC__
 
</StructureSection>
==About this Structure==
[[Category: Escherichia phage RB69]]
[[4dts]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DTS OCA].
[[Category: Large Structures]]
 
[[Category: Konigsberg WH]]
==Reference==
[[Category: Wang J]]
<ref group="xtra">PMID:022630605</ref><references group="xtra"/>
[[Category: Xia S]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Enterobacteria phage rb69]]
[[Category: Konigsberg, W H.]]
[[Category: Wang, J.]]
[[Category: Xia, S.]]
[[Category: Abasic site]]
[[Category: Dctp]]
[[Category: Rb69pol]]
[[Category: Thf]]
[[Category: Transferase-dna complex]]

Latest revision as of 13:57, 1 March 2024

RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pairRB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair

Structural highlights

4dts is a 3 chain structure with sequence from Escherichia phage RB69. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.96Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DPOL_BPR69 This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.

See Also

4dts, resolution 1.96Å

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