4bcl: Difference between revisions

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{{Seed}}
[[Image:4bcl.png|left|200px]]


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==FMO protein from Prosthecochloris aestuarii 2K at Room Temperature==
The line below this paragraph, containing "STRUCTURE_4bcl", creates the "Structure Box" on the page.
<StructureSection load='4bcl' size='340' side='right'caption='[[4bcl]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[4bcl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prosthecochloris_aestuarii Prosthecochloris aestuarii]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3bcl 3bcl], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2bcl 2bcl] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1bcl 1bcl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BCL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene></td></tr>
{{STRUCTURE_4bcl|  PDB=4bcl  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bcl OCA], [https://pdbe.org/4bcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bcl RCSB], [https://www.ebi.ac.uk/pdbsum/4bcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bcl ProSAT]</span></td></tr>
 
</table>
===BACTERIOCHLOROPHYLL CONTAINING PROTEIN===
== Function ==
 
[https://www.uniprot.org/uniprot/BCPA_PROAE BCPA_PROAE] Intermediary in the transfer of excitation energy from the chlorophyll to the reaction centers.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
4BCL is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Prosthecochloris_aestuarii Prosthecochloris aestuarii]. This structure supersedes the now removed PDB entries and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1bcl 1bcl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BCL OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/4bcl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4bcl ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Prosthecochloris aestuarii]]
[[Category: Prosthecochloris aestuarii]]
[[Category: Matthews, B W.]]
[[Category: Matthews BW]]
[[Category: Tronrud, D E.]]
[[Category: Tronrud DE]]
[[Category: Electron transport]]
[[Category: Excitation energy transfer]]
[[Category: Reaction center]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:51:06 2009''

Latest revision as of 13:40, 1 March 2024

FMO protein from Prosthecochloris aestuarii 2K at Room TemperatureFMO protein from Prosthecochloris aestuarii 2K at Room Temperature

Structural highlights

4bcl is a 1 chain structure with sequence from Prosthecochloris aestuarii. This structure supersedes the now removed PDB entries 3bcl, 2bcl and 1bcl. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BCPA_PROAE Intermediary in the transfer of excitation energy from the chlorophyll to the reaction centers.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

4bcl, resolution 1.90Å

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