3udt: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:3udt.png|left|200px]]
-<!--
+==Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with ADP and IP5.==
-The line below this paragraph, containing "STRUCTURE_3udt", creates the "Structure Box" on the page.
+<StructureSection load='3udt' size='340' side='right'caption='[[3udt]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3udt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDT FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5MY:MYO-INOSITOL-(1,3,4,5,6)-PENTAKISPHOSPHATE'>5MY</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_3udt|  PDB=3udt  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udt OCA], [https://pdbe.org/3udt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udt RCSB], [https://www.ebi.ac.uk/pdbsum/3udt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udt ProSAT]</span></td></tr>
+</table>
-===Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with ADP and IP5.===
+== Function ==
+[https://www.uniprot.org/uniprot/IPPK_ARATH IPPK_ARATH] Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). Phytate is a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate store in plant seeds. Also phosphorylates Ins(1,3,4,6)P4 and Ins(1,4,5,6)P4 to produce Ins(1,2,3,4,6)P5 and Ins(1,2,4,5,6)P5.<ref>PMID:16107538</ref> <ref>PMID:16223361</ref>
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_22362712}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 22362712 is the PubMed ID number.
+</StructureSection>
--->
-{{ABSTRACT_PUBMED_22362712}}
-==About this Structure==
-[[3udt]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDT OCA].
-==Reference==
-<ref group="xtra">PMID:022362712</ref><references group="xtra"/>
 [[Category: Arabidopsis thaliana]]
-[[Category: Inositol-pentakisphosphate 2-kinase]]
+[[Category: Large Structures]]
-[[Category: Gosein, V.]]
+[[Category: Gosein V]]
-[[Category: Krajden, O.]]
+[[Category: Krajden O]]
-[[Category: Leung, T F.]]
+[[Category: Leung T-F]]
-[[Category: Miller, G J.]]
+[[Category: Miller GJ]]
-[[Category: Atipk1]]
-[[Category: Inositol]]
-[[Category: Ins5p 2-k]]
-[[Category: Ip5 2-k]]
-[[Category: Ipk]]
-[[Category: Polyphosphate kinase]]
-[[Category: Transferase]]