3tae: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3tae.png|left|200px]]


<!--
==5-hydroxycytosine paired with dAMP in RB69 gp43==
The line below this paragraph, containing "STRUCTURE_3tae", creates the "Structure Box" on the page.
<StructureSection load='3tae' size='340' side='right'caption='[[3tae]], [[Resolution|resolution]] 2.71&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3tae]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TAE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TAE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.71&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5OC:2-DEOXY-5-HYDROXYCYTIDINE+5-(DIHYDROGEN+PHOSPHATE)'>5OC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3tae|  PDB=3tae  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tae FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tae OCA], [https://pdbe.org/3tae PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tae RCSB], [https://www.ebi.ac.uk/pdbsum/3tae PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tae ProSAT]</span></td></tr>
 
</table>
===5-hydroxycytosine paired with dAMP in RB69 gp43===
== Function ==
 
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.
 
<!--
The line below this paragraph, {{ABSTRACT_PUBMED_22026756}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 22026756 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_22026756}}
 
==About this Structure==
[[3tae]] is a 12 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TAE OCA].  


==See Also==
==See Also==
*[[DNA polymerase]]
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:022026756</ref><references group="xtra"/>
[[Category: Escherichia phage RB69]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Large Structures]]
[[Category: Enterobacteria phage rb69]]
[[Category: Zahn KE]]
[[Category: Zahn, K E.]]
[[Category: Transferase-dna complex]]

Latest revision as of 13:07, 1 March 2024

5-hydroxycytosine paired with dAMP in RB69 gp435-hydroxycytosine paired with dAMP in RB69 gp43

Structural highlights

3tae is a 12 chain structure with sequence from Escherichia phage RB69. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.71Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DPOL_BPR69 This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.

See Also

3tae, resolution 2.71Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3tae&oldid=4071773"