3suq: Difference between revisions

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[[Image:3suq.png|left|200px]]


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==RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)==
The line below this paragraph, containing "STRUCTURE_3suq", creates the "Structure Box" on the page.
<StructureSection load='3suq' size='340' side='right'caption='[[3suq]], [[Resolution|resolution]] 3.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3suq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SUQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2DA:2,3-DIDEOXYADENOSINE-5-MONOPHOSPHATE'>2DA</scene>, <scene name='pdbligand=2PR:2-AMINO-9-[2-DEOXYRIBOFURANOSYL]-9H-PURINE-5-MONOPHOSPHATE'>2PR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DCP:2-DEOXYCYTIDINE-5-TRIPHOSPHATE'>DCP</scene></td></tr>
{{STRUCTURE_3suq|  PDB=3suq  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3suq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3suq OCA], [https://pdbe.org/3suq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3suq RCSB], [https://www.ebi.ac.uk/pdbsum/3suq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3suq ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.


===RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)===
==See Also==
 
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_22023103}}, adds the Publication Abstract to the page
[[Category: Escherichia phage RB69]]
(as it appears on PubMed at http://www.pubmed.gov), where 22023103 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Konigsberg WH]]
{{ABSTRACT_PUBMED_22023103}}
[[Category: Wang J]]
 
[[Category: Xia S]]
==About this Structure==
[[3suq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SUQ OCA].
 
==Reference==
<ref group="xtra">PMID:022023103</ref><references group="xtra"/>
[[Category: DNA-directed DNA polymerase]]
[[Category: Enterobacteria phage rb69]]
[[Category: Konigsberg, W H.]]
[[Category: Wang, J.]]
[[Category: Xia, S.]]
[[Category: 2-aminopurine]]
[[Category: At rich]]
[[Category: Dctp]]
[[Category: Rb69pol]]
[[Category: Transferase-dna complex]]
[[Category: Y567a]]

Latest revision as of 12:57, 1 March 2024

RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)

Structural highlights

3suq is a 3 chain structure with sequence from Escherichia phage RB69. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.15Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DPOL_BPR69 This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.

See Also

3suq, resolution 3.15Å

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