3rtp: Difference between revisions

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{{STRUCTURE_3rtp|  PDB=3rtp  |  SCENE=  }}
===Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration===
{{ABSTRACT_PUBMED_21813278}}


==Disease==
==Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration==
[[http://www.uniprot.org/uniprot/MK10_HUMAN MK10_HUMAN]] Defects in MAPK10 are a cause of epileptic encephalopathy Lennox-Gastaut type (EELG) [MIM:[http://omim.org/entry/606369 606369]]. Epileptic encephalopathies of the Lennox-Gastaut group are childhood epileptic disorders characterized by severe psychomotor delay and seizures. Note=A chromosomal aberration involving MAPK10 has been found in a single patient. Translocation t(Y;4)(q11.2;q21) which causes MAPK10 truncation.  
<StructureSection load='3rtp' size='340' side='right'caption='[[3rtp]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3rtp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RTP FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=34I:N-[4-CYANO-3-(1H-1,2,4-TRIAZOL-5-YL)THIOPHEN-2-YL]-2-(2-OXO-3,4-DIHYDROQUINOLIN-1(2H)-YL)ACETAMIDE'>34I</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rtp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rtp OCA], [https://pdbe.org/3rtp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rtp RCSB], [https://www.ebi.ac.uk/pdbsum/3rtp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rtp ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/MK10_HUMAN MK10_HUMAN] Defects in MAPK10 are a cause of epileptic encephalopathy Lennox-Gastaut type (EELG) [MIM:[https://omim.org/entry/606369 606369]. Epileptic encephalopathies of the Lennox-Gastaut group are childhood epileptic disorders characterized by severe psychomotor delay and seizures. Note=A chromosomal aberration involving MAPK10 has been found in a single patient. Translocation t(Y;4)(q11.2;q21) which causes MAPK10 truncation.
== Function ==
[https://www.uniprot.org/uniprot/MK10_HUMAN MK10_HUMAN] Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.<ref>PMID:11718727</ref>


==Function==
==See Also==
[[http://www.uniprot.org/uniprot/MK10_HUMAN MK10_HUMAN]] Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.<ref>PMID:11718727</ref> 
*[[Mitogen-activated protein kinase 3D structures|Mitogen-activated protein kinase 3D structures]]
 
== References ==
==About this Structure==
<references/>
[[3rtp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RTP OCA].
__TOC__
 
</StructureSection>
==Reference==
<references group="xtra"/><references/>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Mitogen-activated protein kinase]]
[[Category: Large Structures]]
[[Category: Artis, D R.]]
[[Category: Artis DR]]
[[Category: Bard, F.]]
[[Category: Bard F]]
[[Category: Bowers, S.]]
[[Category: Bowers S]]
[[Category: Chan, W.]]
[[Category: Chan W]]
[[Category: Chen, L.]]
[[Category: Chen L]]
[[Category: Dryer, M.]]
[[Category: Dryer M]]
[[Category: Galemmo, R A.]]
[[Category: Galemmo Jr RA]]
[[Category: Goldbach, E.]]
[[Category: Goldbach E]]
[[Category: Griswold-Prenne, I.]]
[[Category: Griswold-Prenne I]]
[[Category: Hom, R K.]]
[[Category: Hom RK]]
[[Category: Konradi, A W.]]
[[Category: Konradi AW]]
[[Category: Lin, M.]]
[[Category: Lin M]]
[[Category: Lorentzen, C.]]
[[Category: Lorentzen C]]
[[Category: Neitz, R J.]]
[[Category: Neitz RJ]]
[[Category: Pan, H.]]
[[Category: Pan H]]
[[Category: Peterson, B.]]
[[Category: Peterson B]]
[[Category: Powell, K.]]
[[Category: Powell K]]
[[Category: Probst, G D.]]
[[Category: Probst GD]]
[[Category: Quincy, Q.]]
[[Category: Quincy Q]]
[[Category: Quinn, K P.]]
[[Category: Quinn KP]]
[[Category: Ren, Z.]]
[[Category: Ren Z]]
[[Category: Ruslim, L.]]
[[Category: Ruslim L]]
[[Category: Samant, B.]]
[[Category: Samant B]]
[[Category: Sauer, J.]]
[[Category: Sauer J]]
[[Category: Sealy, J M.]]
[[Category: Sealy JM]]
[[Category: Sham, H L.]]
[[Category: Sham HL]]
[[Category: Tonn, G.]]
[[Category: Tonn G]]
[[Category: Truong, A P.]]
[[Category: Truong AP]]
[[Category: Wong, K.]]
[[Category: Wong K]]
[[Category: Wright, S.]]
[[Category: Wright S]]
[[Category: Yao, N.]]
[[Category: Yao N]]
[[Category: Yednock, T A.]]
[[Category: Yednock TA]]
[[Category: Zhang, H.]]
[[Category: Zhang H]]
[[Category: Zmolek, W.]]
[[Category: Zmolek W]]
[[Category: Jnk inhibitor]]
[[Category: Neurodegeneration]]
[[Category: Pharmacokinetic property]]
[[Category: Transferase-transferase inhibitor complex]]

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