3nuq: Difference between revisions

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-{{STRUCTURE_3nuq|  PDB=3nuq  |  SCENE=  }}
-===Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae===
-==About this Structure==
+==Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae==
-[[3nuq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUQ OCA].
+<StructureSection load='3nuq' size='340' side='right'caption='[[3nuq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-[[Category: 5'-nucleotidase]]
+== Structural highlights ==
-[[Category: Saccharomyces cerevisiae]]
+<table><tr><td colspan='2'>[[3nuq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NUQ FirstGlance]. <br>
-[[Category: Brown, G.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-[[Category: Dong, A.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-[[Category: Edwards, A M.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nuq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nuq OCA], [https://pdbe.org/3nuq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nuq RCSB], [https://www.ebi.ac.uk/pdbsum/3nuq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nuq ProSAT]</span></td></tr>
-[[Category: Evdokimova, E.]]
+</table>
-[[Category: Joachimiak, A.]]
+== Function ==
-[[Category: Kudritsdka, M.]]
+[https://www.uniprot.org/uniprot/SDT1_YEAST SDT1_YEAST] Could be an enzyme that inactivates 6-azauracil by modifying it.
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+== Evolutionary Conservation ==
-[[Category: Savchenko, A.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Singer, A U.]]
+Check<jmol>
-[[Category: Yakunin, A F.]]
+  <jmolCheckbox>
-[[Category: Yang, C.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nu/3nuq_consurf.spt"</scriptWhenChecked>
-[[Category: Alpha-beta hydrolase]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Hydrolase]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Mcsg]]
+  </jmolCheckbox>
-[[Category: Metal dependent]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nuq ConSurf].
-[[Category: Midwest center for structural genomic]]
+<div style="clear:both"></div>
-[[Category: Protein structure initiative]]
+__TOC__
-[[Category: Psi-2]]
+</StructureSection>
-[[Category: Pyrimidine nucleotidase]]
+[[Category: Large Structures]]
-[[Category: Resistance to pyrimidine derivative]]
+[[Category: Saccharomyces cerevisiae S288C]]
-[[Category: Structural genomic]]
+[[Category: Brown G]]
-[[Category: Suppresses the 6-au sensitivity of transcription elongation factor s-ii]]
+[[Category: Dong A]]
+[[Category: Edwards AM]]
+[[Category: Evdokimova E]]
+[[Category: Joachimiak A]]
+[[Category: Kudritsdka M]]
+[[Category: Savchenko A]]
+[[Category: Singer AU]]
+[[Category: Yakunin AF]]
+[[Category: Yang C]]