3nuq: Difference between revisions

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[[Image:3nuq.jpg|left|200px]]


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==Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae==
The line below this paragraph, containing "STRUCTURE_3nuq", creates the "Structure Box" on the page.
<StructureSection load='3nuq' size='340' side='right'caption='[[3nuq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nuq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NUQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
{{STRUCTURE_3nuq|  PDB=3nuq  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nuq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nuq OCA], [https://pdbe.org/3nuq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nuq RCSB], [https://www.ebi.ac.uk/pdbsum/3nuq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nuq ProSAT]</span></td></tr>
 
</table>
===Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae===
== Function ==
 
[https://www.uniprot.org/uniprot/SDT1_YEAST SDT1_YEAST] Could be an enzyme that inactivates 6-azauracil by modifying it.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3NUQ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUQ OCA].  
Check<jmol>
[[Category: 5'-nucleotidase]]
  <jmolCheckbox>
[[Category: Saccharomyces cerevisiae]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nu/3nuq_consurf.spt"</scriptWhenChecked>
[[Category: Brown, G.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Dong, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Edwards, A M.]]
  </jmolCheckbox>
[[Category: Evdokimova, E.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nuq ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: Kudritsdka, M.]]
__TOC__
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</StructureSection>
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Singer, A U.]]
[[Category: Saccharomyces cerevisiae S288C]]
[[Category: Yakunin, A F.]]
[[Category: Brown G]]
[[Category: Yang, C.]]
[[Category: Dong A]]
[[Category: Alpha-beta hydrolase]]
[[Category: Edwards AM]]
[[Category: Hydrolase]]
[[Category: Evdokimova E]]
[[Category: Mcsg]]
[[Category: Joachimiak A]]
[[Category: Metal dependent]]
[[Category: Kudritsdka M]]
[[Category: Midwest center for structural genomic]]
[[Category: Savchenko A]]
[[Category: Protein structure initiative]]
[[Category: Singer AU]]
[[Category: Psi-2]]
[[Category: Yakunin AF]]
[[Category: Pyrimidine nucleotidase]]
[[Category: Yang C]]
[[Category: Resistance to pyrimidine derivative]]
[[Category: Structural genomic]]
[[Category: Suppresses the 6-au sensitivity of transcription elongation factor s-ii]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:50:29 2010''

Latest revision as of 13:30, 21 February 2024

Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiaeStructure of a putative nucleotide phosphatase from Saccharomyces cerevisiae

Structural highlights

3nuq is a 1 chain structure with sequence from Saccharomyces cerevisiae S288C. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SDT1_YEAST Could be an enzyme that inactivates 6-azauracil by modifying it.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3nuq, resolution 1.70Å

Drag the structure with the mouse to rotate

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OCA
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