3mpc: Difference between revisions

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OCA

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-[[Image:3mpc.png|left|200px]]
-<!--
+==The crystal structure of a Fn3-like protein from Clostridium thermocellum==
-The line below this paragraph, containing "STRUCTURE_3mpc", creates the "Structure Box" on the page.
+<StructureSection load='3mpc' size='340' side='right'caption='[[3mpc]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3mpc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MPC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_3mpc|  PDB=3mpc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mpc OCA], [https://pdbe.org/3mpc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mpc RCSB], [https://www.ebi.ac.uk/pdbsum/3mpc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mpc ProSAT]</span></td></tr>
+</table>
-===The crystal structure of a Fn3-like protein from Clostridium thermocellum===
+== Function ==
+[https://www.uniprot.org/uniprot/A3DHG6_ACET2 A3DHG6_ACET2]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_20693658}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 20693658 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mp/3mpc_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_20693658}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[3mpc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPC OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mpc ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:020693658</ref><references group="xtra"/>
+</StructureSection>
-[[Category: Clostridium thermocellum]]
+[[Category: Acetivibrio thermocellus ATCC 27405]]
-[[Category: Alahuhta, M P.]]
+[[Category: Large Structures]]
-[[Category: Brunecky, R.]]
+[[Category: Alahuhta MP]]
-[[Category: Lunin, V V.]]
+[[Category: Brunecky R]]
-[[Category: Xu, Q.]]
+[[Category: Lunin VV]]
-[[Category: Fibronectin]]
+[[Category: Xu Q]]
-[[Category: Fn3]]
-[[Category: Unknown function]]