3ma8: Difference between revisions

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==Crystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium Parvum==
==Crystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium Parvum==
<StructureSection load='3ma8' size='340' side='right' caption='[[3ma8]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
<StructureSection load='3ma8' size='340' side='right'caption='[[3ma8]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ma8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Crypi Crypi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MA8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ma8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MA8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.64&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cgd1_2040 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353152 CRYPI])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate_kinase Pyruvate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.40 2.7.1.40] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ma8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ma8 OCA], [https://pdbe.org/3ma8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ma8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ma8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ma8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ma8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ma8 OCA], [http://pdbe.org/3ma8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ma8 RCSB], [http://www.ebi.ac.uk/pdbsum/3ma8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ma8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5CSM7_CRYPI Q5CSM7_CRYPI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ma/3ma8_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ma/3ma8_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
*[[Pyruvate Kinase|Pyruvate Kinase]]
*[[Pyruvate kinase 3D structures|Pyruvate kinase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Crypi]]
[[Category: Cryptosporidium parvum Iowa II]]
[[Category: Pyruvate kinase]]
[[Category: Large Structures]]
[[Category: Arrowsmith, C H]]
[[Category: Arrowsmith CH]]
[[Category: Bochkarev, A]]
[[Category: Bochkarev A]]
[[Category: Bountra, C]]
[[Category: Bountra C]]
[[Category: Cossar, D]]
[[Category: Cossar D]]
[[Category: Edwards, A M]]
[[Category: Edwards AM]]
[[Category: Hassanali, A]]
[[Category: Hassanali A]]
[[Category: Hills, T]]
[[Category: Hills T]]
[[Category: Hui, R]]
[[Category: Hui R]]
[[Category: Hutchinson, A]]
[[Category: Hutchinson A]]
[[Category: Kozieradzki, I]]
[[Category: Kozieradzki I]]
[[Category: Pizarro, J C]]
[[Category: Pizarro JC]]
[[Category: Structural genomic]]
[[Category: Weigelt J]]
[[Category: Weigelt, J]]
[[Category: Wernimont AK]]
[[Category: Wernimont, A K]]
[[Category: Cryptosporidium parvum]]
[[Category: Glycolysis]]
[[Category: Kinase]]
[[Category: Magnesium]]
[[Category: Parasitology]]
[[Category: Pyruvate]]
[[Category: Pyruvate kiase]]
[[Category: Sgc]]
[[Category: Transferase]]

Latest revision as of 13:24, 21 February 2024

Crystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium ParvumCrystal structure of CGD1_2040, a pyruvate kinase from cryptosporidium Parvum

Structural highlights

3ma8 is a 2 chain structure with sequence from Cryptosporidium parvum Iowa II. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.64Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5CSM7_CRYPI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ma8, resolution 2.64Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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