3lut: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3lut.jpg|left|200px]]


<!--
==A Structural Model for the Full-length Shaker Potassium Channel Kv1.2==
The line below this paragraph, containing "STRUCTURE_3lut", creates the "Structure Box" on the page.
<StructureSection load='3lut' size='340' side='right'caption='[[3lut]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lut]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LUT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LUT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
{{STRUCTURE_3lut| PDB=3lut |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lut FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lut OCA], [https://pdbe.org/3lut PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lut RCSB], [https://www.ebi.ac.uk/pdbsum/3lut PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lut ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/KCAB2_RAT KCAB2_RAT] Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lu/3lut_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lut ConSurf].
<div style="clear:both"></div>


===A Structural Model for the Full-length Shaker Potassium Channel Kv1.2===
==See Also==
 
*[[Potassium channel 3D structures|Potassium channel 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_20534430}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 20534430 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_20534430}}
 
==About this Structure==
3LUT is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LUT OCA].
 
==Reference==
<ref group="xtra">PMID:20534430</ref><ref group="xtra">PMID:16002581</ref><ref group="xtra">PMID:18004376</ref><references group="xtra"/>
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
[[Category: Chen, X.]]
[[Category: Chen X]]
[[Category: Ma, J.]]
[[Category: Ma J]]
[[Category: Ni, F.]]
[[Category: Ni F]]
[[Category: Wang, Q.]]
[[Category: Wang Q]]
[[Category: Acetylation]]
[[Category: Cytoplasm]]
[[Category: Gating charge]]
[[Category: Glycoprotein]]
[[Category: Ion transport]]
[[Category: Ionic channel]]
[[Category: Kv1 2]]
[[Category: Lipoprotein]]
[[Category: Membrane]]
[[Category: Membrane protein]]
[[Category: Nadp]]
[[Category: Normal-mode analysis]]
[[Category: Palmitate]]
[[Category: Phosphoprotein]]
[[Category: Potassium]]
[[Category: Potassium channel]]
[[Category: Potassium transport]]
[[Category: Transmembrane]]
[[Category: Transport]]
[[Category: Voltage gating]]
[[Category: Voltage-gated channel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:50:19 2010''

Latest revision as of 13:22, 21 February 2024

A Structural Model for the Full-length Shaker Potassium Channel Kv1.2A Structural Model for the Full-length Shaker Potassium Channel Kv1.2

Structural highlights

3lut is a 2 chain structure with sequence from Rattus norvegicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

KCAB2_RAT Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3lut, resolution 2.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3lut&oldid=4066426"