3lu0: Difference between revisions

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[[Image:3lu0.jpg|left|200px]]


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==Molecular model of Escherichia coli core RNA polymerase==
The line below this paragraph, containing "STRUCTURE_3lu0", creates the "Structure Box" on the page.
<SX load='3lu0' size='340' side='right' viewer='molstar' caption='[[3lu0]], [[Resolution|resolution]] 11.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lu0]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LU0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LU0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 11.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3lu0| PDB=3lu0 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lu0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lu0 OCA], [https://pdbe.org/3lu0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lu0 RCSB], [https://www.ebi.ac.uk/pdbsum/3lu0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lu0 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RPOA_ECOLI RPOA_ECOLI] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit plays an important role in subunit assembly since its dimerization is the first step in the sequential assembly of subunits to form the holoenzyme.[HAMAP-Rule:MF_00059]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lu/3lu0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lu0 ConSurf].
<div style="clear:both"></div>


===Molecular model of Escherichia coli core RNA polymerase===
==See Also==
 
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
 
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The line below this paragraph, {{ABSTRACT_PUBMED_20856905}}, adds the Publication Abstract to the page
[[Category: Escherichia coli K-12]]
(as it appears on PubMed at http://www.pubmed.gov), where 20856905 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Darst SA]]
{{ABSTRACT_PUBMED_20856905}}
 
==About this Structure==
3LU0 is a 5 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LU0 OCA].
 
==Reference==
<ref group="xtra">PMID:20856905</ref><references group="xtra"/>
[[Category: DNA-directed RNA polymerase]]
[[Category: Escherichia coli]]
[[Category: Darst, S A.]]
[[Category: Dna-directed rna polymerase]]
[[Category: E. coli rna polymerase]]
[[Category: Nucleotidyltransferase]]
[[Category: Transcription]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 29 08:14:50 2010''

Latest revision as of 13:22, 21 February 2024

Molecular model of Escherichia coli core RNA polymeraseMolecular model of Escherichia coli core RNA polymerase

3lu0, resolution 11.20Å

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OCA
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