3lpy: Difference between revisions

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-{{Seed}}
-[[Image:3lpy.jpg|left|200px]]
-<!--
+==Crystal structure of the RRM domain of CyP33==
-The line below this paragraph, containing "STRUCTURE_3lpy", creates the "Structure Box" on the page.
+<StructureSection load='3lpy' size='340' side='right'caption='[[3lpy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3lpy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LPY FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_3lpy|  PDB=3lpy  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lpy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpy OCA], [https://pdbe.org/3lpy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lpy RCSB], [https://www.ebi.ac.uk/pdbsum/3lpy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpy ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PPIE_HUMAN PPIE_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Combines RNA-binding and PPIase activities. May be involved in muscle- and brain-specific processes. May be involved in pre-mRNA splicing.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lp/3lpy_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lpy ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of the RRM domain of CyP33===
+==See Also==
+*[[Cyclophilin 3D structures|Cyclophilin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_20541251}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 20541251 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_20541251}}
-==About this Structure==
-LPY is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPY OCA].
-==Reference==
-<ref group="xtra">PMID:20541251</ref><references group="xtra"/>
 [[Category: Homo sapiens]]
-[[Category: Peptidylprolyl isomerase]]
+[[Category: Large Structures]]
-[[Category: Patel, D J.]]
+[[Category: Patel DJ]]
-[[Category: Wang, Z.]]
+[[Category: Wang Z]]
-[[Category: Cyp33]]
-[[Category: Isomerase]]
-[[Category: Mll1 binding]]
-[[Category: Mrna processing]]
-[[Category: Mrna splicing]]
-[[Category: Nucleus]]
-[[Category: Rna-binding]]
-[[Category: Rotamase]]
-[[Category: Rrm]]
-[[Category: Spliceosome]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  7 08:41:13 2010''