3lid: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3lid|  PDB=3lid  |  SCENE=  }}
===Crystal Structure of the extracellular domain of the putative histidine kinase vpHK1S-Z8===
{{ABSTRACT_PUBMED_20435045}}


==About this Structure==
==Crystal Structure of the extracellular domain of the putative histidine kinase vpHK1S-Z8==
[[3lid]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LID OCA].  
<StructureSection load='3lid' size='340' side='right'caption='[[3lid]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[3lid]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LID FirstGlance]. <br>
<ref group="xtra">PMID:020435045</ref><references group="xtra"/><references/>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lid OCA], [https://pdbe.org/3lid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lid RCSB], [https://www.ebi.ac.uk/pdbsum/3lid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lid ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q87SR8_VIBPA Q87SR8_VIBPA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/li/3lid_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lid ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Vibrio parahaemolyticus]]
[[Category: Vibrio parahaemolyticus]]
[[Category: Hendrickson, W A.]]
[[Category: Hendrickson WA]]
[[Category: Zhang, Z.]]
[[Category: Zhang Z]]
[[Category: Pdc fold]]
[[Category: Signaling protein]]

Latest revision as of 13:20, 21 February 2024

Crystal Structure of the extracellular domain of the putative histidine kinase vpHK1S-Z8Crystal Structure of the extracellular domain of the putative histidine kinase vpHK1S-Z8

Structural highlights

3lid is a 2 chain structure with sequence from Vibrio parahaemolyticus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.76Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q87SR8_VIBPA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lid, resolution 1.76Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA