3kcp: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{STRUCTURE_3kcp|  PDB=3kcp  |  SCENE=  }}
-===Crystal structure of interacting Clostridium thermocellum multimodular components===
-{{ABSTRACT_PUBMED_20070943}}
-==Function==
+==Crystal structure of interacting Clostridium thermocellum multimodular components==
-[[http://www.uniprot.org/uniprot/CIPA_CLOTH CIPA_CLOTH]] Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes.
+<StructureSection load='3kcp' size='340' side='right'caption='[[3kcp]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3kcp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KCP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KCP FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kcp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kcp OCA], [https://pdbe.org/3kcp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kcp RCSB], [https://www.ebi.ac.uk/pdbsum/3kcp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kcp ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CIPA_ACET2 CIPA_ACET2] Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/3kcp_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kcp ConSurf].
+<div style="clear:both"></div>
-==About this Structure==
+==See Also==
-[[3kcp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum_atcc_27405 Clostridium thermocellum atcc 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KCP OCA].
+*[[Cellulosome scaffolding protein 3D structures|Cellulosome scaffolding protein 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:020070943</ref><references group="xtra"/><references/>
+[[Category: Acetivibrio thermocellus ATCC 27405]]
-[[Category: Clostridium thermocellum atcc 27405]]
+[[Category: Large Structures]]
-[[Category: Adams, J J.]]
+[[Category: Adams JJ]]
-[[Category: Bayer, E A.]]
+[[Category: Bayer EA]]
-[[Category: Currie, M A.]]
+[[Category: Currie MA]]
-[[Category: Jia, Z.]]
+[[Category: Jia Z]]
-[[Category: Smith, S P.]]
+[[Category: Smith SP]]
-[[Category: Carbohydrate metabolism]]
-[[Category: Cell wall biogenesis/degradation]]
-[[Category: Cellulose degradation]]
-[[Category: Cellulosome]]
-[[Category: Cohesin]]
-[[Category: Dockerin]]
-[[Category: Glycoprotein]]
-[[Category: Polysaccharide degradation]]
-[[Category: Secreted]]
-[[Category: Structural protein]]
-[[Category: X-module]]