3iyo: Difference between revisions

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[[Image:3iyo.png|left|200px]]


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==Cryo-EM model of virion-sized HEV virion-sized capsid==
The line below this paragraph, containing "STRUCTURE_3iyo", creates the "Structure Box" on the page.
<SX load='3iyo' size='340' side='right' viewer='molstar' caption='[[3iyo]], [[Resolution|resolution]] 10.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iyo]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Orthohepevirus_A Orthohepevirus A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 10.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyo OCA], [https://pdbe.org/3iyo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyo RCSB], [https://www.ebi.ac.uk/pdbsum/3iyo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyo ProSAT]</span></td></tr>
{{STRUCTURE_3iyo| PDB=3iyo |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q1AHV0_HEV Q1AHV0_HEV]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyo_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyo ConSurf].
<div style="clear:both"></div>


===Cryo-EM model of virion-sized HEV virion-sized capsid===
==See Also==
 
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
__TOC__
<!--
</SX>
The line below this paragraph, {{ABSTRACT_PUBMED_020720013}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 020720013 is the PubMed ID number.
[[Category: Orthohepevirus A]]
-->
[[Category: Cheng RH]]
{{ABSTRACT_PUBMED_020720013}}
[[Category: Li TC]]
 
[[Category: Mayazaki N]]
==About this Structure==
[[Category: Miyamura T]]
[[3iyo]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Hepatitis_e_virus Hepatitis e virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYO OCA].
[[Category: Moore M]]
 
[[Category: Simons MN]]
==Reference==
[[Category: Takeda N]]
<ref group="xtra">PMID:020720013</ref><references group="xtra"/>
[[Category: Wakita T]]
[[Category: Hepatitis e virus]]
[[Category: Wall JS]]
[[Category: Cheng, R H.]]
[[Category: Wang CY]]
[[Category: Li, T C.]]
[[Category: Xing L]]
[[Category: Mayazaki, N.]]
[[Category: Miyamura, T.]]
[[Category: Moore, M.]]
[[Category: Simons, M N.]]
[[Category: Takeda, N.]]
[[Category: Wakita, T.]]
[[Category: Wall, J S.]]
[[Category: Wang, C Y.]]
[[Category: Xing, L.]]
[[Category: Amino acid sequence]]
[[Category: Capsid]]
[[Category: Capsid protein]]
[[Category: Computer-assisted]]
[[Category: Cryoelectron microscopy]]
[[Category: Dimerization]]
[[Category: Hepatitis e virus]]
[[Category: Icosahedral virus]]
[[Category: Image processing]]
[[Category: Molecular sequence data]]
[[Category: Protein conformation]]
[[Category: Protein folding]]
[[Category: Protein structure]]
[[Category: Recombinant viral capsid]]
[[Category: Virus]]
[[Category: Virus assembly]]

Latest revision as of 13:08, 21 February 2024

Cryo-EM model of virion-sized HEV virion-sized capsidCryo-EM model of virion-sized HEV virion-sized capsid

3iyo, resolution 10.50Å

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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