3iyf: Difference between revisions

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[[Image:3iyf.png|left|200px]]


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==Atomic Model of the Lidless Mm-cpn in the Open State==
The line below this paragraph, containing "STRUCTURE_3iyf", creates the "Structure Box" on the page.
<SX load='3iyf' size='340' side='right' viewer='molstar' caption='[[3iyf]], [[Resolution|resolution]] 8.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iyf]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyf OCA], [https://pdbe.org/3iyf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyf RCSB], [https://www.ebi.ac.uk/pdbsum/3iyf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyf ProSAT]</span></td></tr>
{{STRUCTURE_3iyf|  PDB=3iyf  |  SCENE=  }}
</table>
 
== Function ==
===Atomic Model of the Lidless Mm-cpn in the Open State===
[https://www.uniprot.org/uniprot/Q877G8_METMI Q877G8_METMI]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_20090755}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 20090755 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyf_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_20090755}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyf ConSurf].
[[3iyf]] is a 16 chain structure of [[Heat Shock Proteins]] with sequence from [http://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYF OCA].  
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Heat Shock Proteins]]
*[[Chaperonin 3D structures|Chaperonin 3D structures]]
 
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
==Reference==
__TOC__
<ref group="xtra">PMID:20090755</ref><references group="xtra"/>
</SX>
[[Category: Large Structures]]
[[Category: Methanococcus maripaludis]]
[[Category: Methanococcus maripaludis]]
[[Category: Baker, M L.]]
[[Category: Baker ML]]
[[Category: Chiu, W.]]
[[Category: Chiu W]]
[[Category: Dougherty, M.]]
[[Category: Dougherty M]]
[[Category: Douglas, N R.]]
[[Category: Douglas NR]]
[[Category: Frydman, J.]]
[[Category: Frydman J]]
[[Category: Fu, C J.]]
[[Category: Fu CJ]]
[[Category: Jakana, J.]]
[[Category: Jakana J]]
[[Category: Levitt, M.]]
[[Category: Levitt M]]
[[Category: Ludtke, S J.]]
[[Category: Ludtke SJ]]
[[Category: Reissmann, S.]]
[[Category: Reissmann S]]
[[Category: Schroeder, G.]]
[[Category: Schroeder G]]
[[Category: Zhang, J.]]
[[Category: Zhang J]]
[[Category: Atp-binding]]
[[Category: Chaperone]]
[[Category: Group ii chaperonin]]
[[Category: Methanococcus maripaludi]]
[[Category: Mm-cpn]]
[[Category: Nucleotide-binding]]
[[Category: Protein folding]]
[[Category: Single particle reconstruction]]

Latest revision as of 13:07, 21 February 2024

Atomic Model of the Lidless Mm-cpn in the Open StateAtomic Model of the Lidless Mm-cpn in the Open State

3iyf, resolution 8.00Å

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OCA
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