3ix6: Difference between revisions

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==Crystal structure of Thymidylate synthase thyA from Brucella melitensis==
==Crystal structure of Thymidylate synthase thyA from Brucella melitensis==
<StructureSection load='3ix6' size='340' side='right' caption='[[3ix6]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3ix6' size='340' side='right'caption='[[3ix6]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ix6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brucella_melitensis Brucella melitensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IX6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ix6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Brucella_melitensis Brucella melitensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IX6 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">thyA, BMEI0608 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29459 Brucella melitensis])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidylate_synthase Thymidylate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.45 2.1.1.45] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ix6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix6 OCA], [https://pdbe.org/3ix6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ix6 RCSB], [https://www.ebi.ac.uk/pdbsum/3ix6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix6 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ix6 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix6 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/TYSY_BRUME TYSY_BRUME]] Provides the sole de novo source of dTMP for DNA biosynthesis (By similarity).  
[https://www.uniprot.org/uniprot/TYSY_BRUME TYSY_BRUME] Provides the sole de novo source of dTMP for DNA biosynthesis (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ix6_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ix6_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ix6 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Thymidylate synthase|Thymidylate synthase]]
*[[Thymidylate synthase 3D structures|Thymidylate synthase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Brucella melitensis]]
[[Category: Brucella melitensis]]
[[Category: Thymidylate synthase]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Brucellosis]]
[[Category: Epididymitis]]
[[Category: Mastitis]]
[[Category: Methyltransferase]]
[[Category: Niaid]]
[[Category: Nucleotide biosynthesis]]
[[Category: Orchitis]]
[[Category: Seattle structural center for infectious disease]]
[[Category: Ssgcid]]
[[Category: Thymidylate]]
[[Category: Transferase]]

Latest revision as of 13:07, 21 February 2024

Crystal structure of Thymidylate synthase thyA from Brucella melitensisCrystal structure of Thymidylate synthase thyA from Brucella melitensis

Structural highlights

3ix6 is a 2 chain structure with sequence from Brucella melitensis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TYSY_BRUME Provides the sole de novo source of dTMP for DNA biosynthesis (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ix6, resolution 2.20Å

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