3irs: Difference between revisions

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==CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica==
==CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica==
<StructureSection load='3irs' size='340' side='right' caption='[[3irs]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
<StructureSection load='3irs' size='340' side='right'caption='[[3irs]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3irs]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"alcaligenes_bronchicanis"_(ferry_1911)_haupt_1935 "alcaligenes bronchicanis" (ferry 1911) haupt 1935]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IRS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IRS FirstGlance]. <br>
<table><tr><td colspan='2'>[[3irs]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_bronchiseptica Bordetella bronchiseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IRS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IRS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BB4693 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=518 "Alcaligenes bronchicanis" (Ferry 1911) Haupt 1935])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3irs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3irs OCA], [http://pdbe.org/3irs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3irs RCSB], [http://www.ebi.ac.uk/pdbsum/3irs PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3irs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3irs OCA], [https://pdbe.org/3irs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3irs RCSB], [https://www.ebi.ac.uk/pdbsum/3irs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3irs ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H3M034_BORBR A0A0H3M034_BORBR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ir/3irs_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ir/3irs_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Almo, S C]]
[[Category: Bordetella bronchiseptica]]
[[Category: Burley, S K]]
[[Category: Large Structures]]
[[Category: Dickey, M]]
[[Category: Almo SC]]
[[Category: Do, J]]
[[Category: Burley SK]]
[[Category: Foti, R]]
[[Category: Dickey M]]
[[Category: Malashkevich, V]]
[[Category: Do J]]
[[Category: Structural genomic]]
[[Category: Foti R]]
[[Category: Patskovsky, Y]]
[[Category: Malashkevich V]]
[[Category: Raushel, F M]]
[[Category: Patskovsky Y]]
[[Category: Sauder, J M]]
[[Category: Raushel FM]]
[[Category: Toro, R]]
[[Category: Sauder JM]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: Toro R]]
[[Category: PSI, Protein structure initiative]]
[[Category: Tim-barrel protein]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]

Latest revision as of 13:06, 21 February 2024

CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchisepticaCRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica

Structural highlights

3irs is a 3 chain structure with sequence from Bordetella bronchiseptica. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.76Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A0H3M034_BORBR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3irs, resolution 1.76Å

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OCA
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