3hoj: Difference between revisions

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[[Image:3hoj.png|left|200px]]


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==Crystal Structure of a Novel Engineered Retroaldolase: RA-22==
The line below this paragraph, containing "STRUCTURE_3hoj", creates the "Structure Box" on the page.
<StructureSection load='3hoj' size='340' side='right'caption='[[3hoj]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3hoj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3b5v 3b5v]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HOJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hoj OCA], [https://pdbe.org/3hoj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hoj RCSB], [https://www.ebi.ac.uk/pdbsum/3hoj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hoj ProSAT]</span></td></tr>
{{STRUCTURE_3hoj|  PDB=3hoj |  SCENE= }}
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/3hoj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hoj ConSurf].
<div style="clear:both"></div>


===Crystal Structure of a Novel Engineered Retroaldolase: RA-22===
==See Also==
 
*[[Aldolase 3D structures|Aldolase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3HOJ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3b5v 3b5v]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HOJ OCA].
[[Category: Large Structures]]
 
==Reference==
<ref group="xtra">PMID:18323453</ref><references group="xtra"/>
[[Category: Indole-3-glycerol-phosphate synthase]]
[[Category: Synthetic construct]]
[[Category: Synthetic construct]]
[[Category: Doyle, L A.]]
[[Category: Doyle LA]]
[[Category: Stoddard, B L.]]
[[Category: Stoddard BL]]
[[Category: Engineered computationally designed]]
[[Category: Lyase]]
[[Category: Retroaldolase]]
[[Category: Tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 17:03:30 2009''

Latest revision as of 13:01, 21 February 2024

Crystal Structure of a Novel Engineered Retroaldolase: RA-22Crystal Structure of a Novel Engineered Retroaldolase: RA-22

Structural highlights

3hoj is a 1 chain structure with sequence from Synthetic construct. This structure supersedes the now removed PDB entry 3b5v. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3hoj, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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