3hhp: Difference between revisions

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-[[Image:3hhp.png|left|200px]]
-<!--
+==Malate dehydrogenase open conformation==
-The line below this paragraph, containing "STRUCTURE_3hhp", creates the "Structure Box" on the page.
+<StructureSection load='3hhp' size='340' side='right'caption='[[3hhp]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3hhp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HHP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HHP FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hhp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hhp OCA], [https://pdbe.org/3hhp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hhp RCSB], [https://www.ebi.ac.uk/pdbsum/3hhp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hhp ProSAT]</span></td></tr>
-{{STRUCTURE_3hhp|  PDB=3hhp  |  SCENE=  }}
+</table>
+== Function ==
-===Malate dehydrogenase open conformation===
+[https://www.uniprot.org/uniprot/MDH_ECOLI MDH_ECOLI] Catalyzes the reversible oxidation of malate to oxaloacetate.[HAMAP-Rule:MF_01516]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_19724119}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 19724119 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/3hhp_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_19724119}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hhp ConSurf].
-[[3hhp]] is a 4 chain structure of [[Malate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HHP OCA].
+<div style="clear:both"></div>
 ==See Also==
-*[[Malate dehydrogenase]]
+*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:19724119</ref><references group="xtra"/>
+[[Category: Escherichia coli K-12]]
-[[Category: Escherichia coli k-12]]
+[[Category: Large Structures]]
-[[Category: Malate dehydrogenase]]
+[[Category: Lamb AL]]
-[[Category: Lamb, A L.]]
+[[Category: Meneely KM]]
-[[Category: Meneely, K M.]]
+[[Category: Zaitseva J]]
-[[Category: Zaitseva, J.]]
-[[Category: Citric acid cycle]]
-[[Category: Malate dehydrogenase]]
-[[Category: Mdh]]
-[[Category: Nad]]
-[[Category: Oxidoreductase]]
-[[Category: Tca cycle]]
-[[Category: Tricarboxylic acid cycle]]