3hh8: Difference between revisions

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 ==Crystal Structure and metal binding properties of the lipoprotein MtsA==
-<StructureSection load='3hh8' size='340' side='right' caption='[[3hh8]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
+<StructureSection load='3hh8' size='340' side='right'caption='[[3hh8]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3hh8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strp1 Strp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HH8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HH8 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3hh8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_M1 Streptococcus pyogenes serotype M1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HH8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HH8 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.87&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mtsA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=301447 STRP1])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hh8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hh8 OCA], [http://pdbe.org/3hh8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hh8 RCSB], [http://www.ebi.ac.uk/pdbsum/3hh8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hh8 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hh8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hh8 OCA], [https://pdbe.org/3hh8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hh8 RCSB], [https://www.ebi.ac.uk/pdbsum/3hh8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hh8 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/MTSA_STRP1 MTSA_STRP1]] Part of an ATP-driven transport system for a metal; this protein has affinity for Zn(2+), Fe(3+) and Cu(2+).
+[https://www.uniprot.org/uniprot/MTSA_STRP1 MTSA_STRP1] Part of an ATP-driven transport system for a metal; this protein has affinity for Zn(2+), Fe(3+) and Cu(2+).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
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 </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hh8 ConSurf].
 <div style="clear:both"></div>
-<div style="background-color:#fffaf0;">
-== Publication Abstract from PubMed ==
-An ability to acquire iron is essential for the viability and growth of almost all organisms and in pathogenic bacteria is strongly correlated with virulence. The cell surface lipoprotein MtsA, a component of the MtsABC transporter of Streptococcus pyogenes, acts as the primary receptor for inorganic iron by this significant human pathogen. Iron is bound as Fe(2+), with the participation of bicarbonate. The crystal structure of MtsA has been determined and refined at 1.8 A resolution (R = 0.167, and R(free) = 0.194). MtsA has the classic bacterial metal binding receptor (MBR) fold, with the Fe(2+) ion bound to the side chains of His68, His140, Glu206, and Asp281, at a totally enclosed site between the two domains of the protein. The absence of bicarbonate from the binding site suggests that it is displaced during the final stages of metal binding. Both the fold and metal binding site are most similar to those of the manganese receptors PsaA and MntC, consistent with the similar coordination requirements of Fe(2+) and Mn(2+). Binding studies confirm a 10-fold preference for Fe(2+) over Mn(2+), although both may be carried in vivo. Mutational analysis of the binding site shows that His140 is critical for a fully functional binding site but that Glu206 is dispensable. The crystal structure explains the distinct roles of these ligands and also reveals potential secondary binding sites that may explain the binding behavior of MtsA for metal ions other than Fe(2+).
-Crystal structure and metal binding properties of the lipoprotein MtsA, responsible for iron transport in Streptococcus pyogenes.,Sun X, Baker HM, Ge R, Sun H, He QY, Baker EN Biochemistry. 2009 Jul 7;48(26):6184-90. PMID:19463017<ref>PMID:19463017</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 3hh8" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[ABC transporter|ABC transporter]]
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-== References ==
-<references/>
 __TOC__
 </StructureSection>
-[[Category: Strp1]]
+[[Category: Large Structures]]
-[[Category: Baker, E N]]
+[[Category: Streptococcus pyogenes serotype M1]]
-[[Category: Baker, H M]]
+[[Category: Baker EN]]
-[[Category: Sun, X]]
+[[Category: Baker HM]]
-[[Category: Ye, Q Y]]
+[[Category: Sun X]]
-[[Category: Cell membrane]]
+[[Category: Ye Q-Y]]
-[[Category: Copper transport]]
-[[Category: Ion transport]]
-[[Category: Iron]]
-[[Category: Iron transport]]
-[[Category: Lipoprotein]]
-[[Category: Membrane]]
-[[Category: Metal binding]]
-[[Category: Metal binding protein]]
-[[Category: Metal-binding]]
-[[Category: Palmitate]]
-[[Category: Transport]]
-[[Category: Zinc transport]]