3haz: Difference between revisions

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-{{Seed}}
-[[Image:3haz.jpg|left|200px]]
-<!--
+==Crystal structure of bifunctional proline utilization A (PutA) protein==
-The line below this paragraph, containing "STRUCTURE_3haz", creates the "Structure Box" on the page.
+<StructureSection load='3haz' size='340' side='right'caption='[[3haz]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3haz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bradyrhizobium_diazoefficiens_USDA_110 Bradyrhizobium diazoefficiens USDA 110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HAZ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_3haz|  PDB=3haz  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3haz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3haz OCA], [https://pdbe.org/3haz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3haz RCSB], [https://www.ebi.ac.uk/pdbsum/3haz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3haz ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q89E26_BRADU Q89E26_BRADU]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/3haz_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3haz ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of bifunctional proline utilization A (PutA) protein===
+==See Also==
+*[[Proline utilization A|Proline utilization A]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_20133651}}, adds the Publication Abstract to the page
+[[Category: Bradyrhizobium diazoefficiens USDA 110]]
-(as it appears on PubMed at http://www.pubmed.gov), where 20133651 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Tanner JJ]]
-{{ABSTRACT_PUBMED_20133651}}
-==About this Structure==
-HAZ is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Bradyrhizobium_japonicum_usda_110 Bradyrhizobium japonicum usda 110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAZ OCA].
-==Reference==
-<ref group="xtra">PMID:20133651</ref><references group="xtra"/>
-[[Category: Bradyrhizobium japonicum usda 110]]
-[[Category: Tanner, J J.]]
-[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
-[[Category: Flavoenzyme]]
-[[Category: Oxidoreductase]]
-[[Category: Proline dehydrogenase]]
-[[Category: Proline utilization some]]
-[[Category: Puta]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 25 13:48:24 2010''