3gqb: Difference between revisions

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[[Image:3gqb.png|left|200px]]


{{STRUCTURE_3gqb|  PDB=3gqb  |  SCENE=  }}
==Crystal Structure of the A3B3 complex from V-ATPase==
 
<StructureSection load='3gqb' size='340' side='right'caption='[[3gqb]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
===Crystal Structure of the A3B3 complex from V-ATPase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3gqb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GQB FirstGlance]. <br>
{{ABSTRACT_PUBMED_19893485}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gqb OCA], [https://pdbe.org/3gqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gqb RCSB], [https://www.ebi.ac.uk/pdbsum/3gqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gqb ProSAT]</span></td></tr>
==About this Structure==
</table>
[[3gqb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQB OCA].  
== Function ==
[https://www.uniprot.org/uniprot/VATA_THET8 VATA_THET8] Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gqb_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gqb ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[ATP synthase|ATP synthase]]
*[[ATPase 3D structures|ATPase 3D structures]]
*[[V-ATPase|V-ATPase]]
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:019893485</ref><references group="xtra"/>
[[Category: Thermus thermophilus HB8]]
[[Category: Thermus thermophilus hb8]]
[[Category: Akimoto S]]
[[Category: Akimoto, S.]]
[[Category: Hori Y]]
[[Category: Hori, Y.]]
[[Category: Iwata M]]
[[Category: Iwata, M.]]
[[Category: Iwata S]]
[[Category: Iwata, S.]]
[[Category: Meher M]]
[[Category: Meher, M.]]
[[Category: Nagata K]]
[[Category: Nagata, K.]]
[[Category: Yokoyama K]]
[[Category: Yokoyama, K.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Yoshida M]]
[[Category: Yoshida, M.]]
[[Category: A3b3]]
[[Category: Atp synthesis]]
[[Category: Atp-binding]]
[[Category: Hydrogen ion transport]]
[[Category: Hydrolase]]
[[Category: Ion transport]]
[[Category: Nucleotide-binding]]
[[Category: Transport]]
[[Category: V-atpase]]

Latest revision as of 12:55, 21 February 2024

Crystal Structure of the A3B3 complex from V-ATPaseCrystal Structure of the A3B3 complex from V-ATPase

Structural highlights

3gqb is a 4 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

VATA_THET8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3gqb, resolution 2.80Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA